Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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500 nt 9477 and 9478 are separated by 621 nucleotides9478 and 9479 are separated by 232 nucleotides9479 and 9480 are separated by 322 nucleotides9480 and 9481 are separated by 170 nucleotides mRNA_1109: 9477 - HMMPfam-Fungal Zn(2)-Cys(6) binuclear cluster domain-PF00172,ProSitePatterns-Zn(2)-C6 fungal-type DNA-binding domain signature.-PS00463,ProSiteProfiles-Zn(2)-C6 fungal-type DNA-binding domain profile.-PS50048,SUPERFAMILY--SSF57701, at 426,954 to 427,895 9477 mRNA_1110: 9478 - Hypothetical Protein, at 428,517 to 429,913 9478 mRNA_1111: 9479 - HMMPfam-Fungal Zn(2)-Cys(6) binuclear cluster domain-PF00172,ProSitePatterns-Zn(2)-C6 fungal-type DNA-binding domain signature.-PS00463,ProSiteProfiles-Zn(2)-C6 fungal-type DNA-binding domain profile.-PS50048,SUPERFAMILY--SSF57701, at 430,146 to 432,940 9479 mRNA_1112: 9480 - Interpro Protein of unknown function (DUF3602) Protein of unknown function (DUF3602) 0, at 433,263 to 434,310 9480 mRNA_1113: 9481 - HMMPfam-Protein of unknown function (DUF3602)-PF12223, at 434,481 to 435,131 9481
Group Condition mRNA_1109 mRNA_1110 mRNA_1111 mRNA_1112 mRNA_1113
9477 9478 9479 9480 9481
buoyancy on lipid accumulation 40 hrs Low Buoyancy -0.1 +0.2 -0.4 +0.1 -1.4
growth on oleic acid YNB Oleic Acid +0.1 -0.2 -0.0 -0.1 -0.7
auxotrophy Dropout Complete -0.3 -0.2 -0.1 -0.1 -0.2
auxotrophy YNB Glucose 75mM Methionine -0.3 -0.2 -0.2 -0.0 -0.1
growth on ypd YPD +0.3 -0.4 -0.4 -0.1 -0.0
growth on ricinoleic acid YNB Glucose -0.1 -0.2 -0.1 -0.3 +0.1
buoyancy on lipid accumulation 40 hrs Median Buoyancy -0.1 +0.1 -0.0 +0.2 -0.6
growth on oleic acid YNB Glucose +0.1 -0.0 -0.2 -0.1 -0.2
buoyancy on lipid accumulation 40 hrs High Buoyancy -0.1 +0.1 +0.2 +0.3 -0.8
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation -0.0 +0.3 -0.3 +0.2 -0.5
facs on lipid accumulation Sorted High BODIPY Gate -0.4 +0.4 -0.0 -0.2 -0.0
ypd buoyancy 40 hrs High Buoyancy +0.1 +0.2 -0.0 +0.2 -0.6
auxotrophy YNB Glucose 75mM Arginine -0.2 -0.1 -0.2 +0.0 +0.3
growth on ricinoleic acid YNB Ricinoleic Acid -0.2 -0.1 +0.2 -0.4 +0.4
growth on ricinoleic acid YNB Methylricinoleic Acid +0.0 -0.1 +0.0 -0.4 +0.3
facs on lipid accumulation Sorted Low BODIPY Gate -0.3 +0.2 -0.1 -0.1 +0.4
auxotrophy YNB Glucose -0.1 -0.1 +0.1 +0.0 +0.1
ypd buoyancy 40 hrs Median Buoyancy +0.3 +0.1 -0.1 +0.3 -0.2
ypd buoyancy 40 hrs Low Buoyancy +0.2 +0.2 -0.1 +0.2 -0.1
facs on lipid accumulation Sorted No BODIPY Gate -0.1 +0.6 -0.4 +0.2 +0.2
ypd buoyancy 40 hrs No Buoyancy Separation -0.0 +0.3 +0.1 +0.4 -0.0
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