Fitness for 5 genes in Rhodosporidium toruloides IFO0880

Add gene:

Number of genes on each side:  

Top 21 experiments (either direction), sorted by average fitness

Or view all 21 experiments or choose conditions or try the comparative fitness browser

500 nt 9481 and 9482 are separated by 250 nucleotides9482 and 9483 are separated by 337 nucleotides9483 and 9484 are separated by 253 nucleotides9484 and 9485 are separated by 132 nucleotides mRNA_1113: 9481 - HMMPfam-Protein of unknown function (DUF3602)-PF12223, at 434,481 to 435,131 9481 mRNA_1114: 9482 - KOG1396 Uncharacterized conserved protein, at 435,382 to 439,006 9482 mRNA_1115: 9483 - SUPERFAMILY--SSF52047, at 439,344 to 441,081 9483 mRNA_1116: 9484 - KOG0255 Synaptic vesicle transporter SVOP and related transporters (major facilitator superfamily), at 441,335 to 443,528 9484 mRNA_1117: 9485 - K13102 KIN DNA/RNA-binding protein KIN17, at 443,661 to 444,962 9485
Group Condition mRNA_1113 mRNA_1114 mRNA_1115 mRNA_1116 mRNA_1117
9481 9482 9483 9484 9485
ypd buoyancy 40 hrs High Buoyancy -0.6 -0.3 -0.2 +0.1 N.D.
buoyancy on lipid accumulation 40 hrs Low Buoyancy -1.4 +0.3 +0.2 +0.2 N.D.
growth on oleic acid YNB Oleic Acid -0.7 +0.3 -0.0 -0.3 N.D.
buoyancy on lipid accumulation 40 hrs High Buoyancy -0.8 -0.2 +0.2 +0.2 N.D.
facs on lipid accumulation Sorted High BODIPY Gate -0.0 -0.4 -0.1 +0.2 N.D.
ypd buoyancy 40 hrs Median Buoyancy -0.2 -0.1 -0.1 +0.1 N.D.
growth on oleic acid YNB Glucose -0.2 +0.4 -0.2 -0.2 N.D.
auxotrophy YNB Glucose 75mM Methionine -0.1 -0.1 +0.3 -0.2 N.D.
ypd buoyancy 40 hrs Low Buoyancy -0.1 -0.0 -0.1 +0.1 N.D.
ypd buoyancy 40 hrs No Buoyancy Separation -0.0 +0.2 -0.4 +0.2 N.D.
buoyancy on lipid accumulation 40 hrs Median Buoyancy -0.6 +0.3 +0.1 +0.3 N.D.
auxotrophy YNB Glucose 75mM Arginine +0.3 -0.2 +0.1 -0.1 N.D.
auxotrophy YNB Glucose +0.1 -0.1 +0.1 +0.1 N.D.
auxotrophy Dropout Complete -0.2 +0.1 +0.2 +0.2 N.D.
facs on lipid accumulation Sorted No BODIPY Gate +0.2 -0.2 +0.2 +0.2 N.D.
growth on ypd YPD -0.0 +0.3 -0.1 +0.3 N.D.
facs on lipid accumulation Sorted Low BODIPY Gate +0.4 -0.2 -0.1 +0.3 N.D.
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation -0.5 +0.6 +0.3 +0.2 N.D.
growth on ricinoleic acid YNB Glucose +0.1 +0.3 +0.3 +0.0 N.D.
growth on ricinoleic acid YNB Ricinoleic Acid +0.4 +0.4 +0.2 +0.1 N.D.
growth on ricinoleic acid YNB Methylricinoleic Acid +0.3 +0.7 +0.2 -0.1 N.D.
remove
mRNA_1113
plot
remove
mRNA_1114
plot
remove
mRNA_1115
remove
mRNA_1116
plot
remove
mRNA_1117
plot