Fitness Browser
Home
Find Gene
BLAST
Experiments
Organisms
Help
Gene
Fitness
Nearby
Cofit
Protein
Homologs
Fitness for 5 genes in
Rhodosporidium toruloides IFO0880
Add gene:
Go
Number of genes on each side:
1
2
3
4
5
Go
Top 21 experiments (either direction), sorted by average fitness
Or view
all 21 experiments
or
choose conditions
or try the
comparative fitness browser
500 nt
9483 and 9484 are separated by 253 nucleotides
9484 and 9485 are separated by 132 nucleotides
9485 and 9486 are separated by 456 nucleotides
9486 and 9487 are separated by 677 nucleotides
mRNA_1115: 9483 - SUPERFAMILY--SSF52047, at 439,344 to 441,081
9483
mRNA_1116: 9484 - KOG0255 Synaptic vesicle transporter SVOP and related transporters (major facilitator superfamily), at 441,335 to 443,528
9484
mRNA_1117: 9485 - K13102 KIN DNA/RNA-binding protein KIN17, at 443,661 to 444,962
9485
mRNA_1118: 9486 - HMMPfam-RTA1 like protein-PF04479, at 445,419 to 446,946
9486
mRNA_1119: 9487 - Hypothetical Protein, at 447,624 to 448,229
9487
Group
Condition
mRNA
_1115
mRNA
_1116
mRNA
_1117
mRNA
_1118
mRNA
_1119
9483
9484
9485
9486
9487
ypd buoyancy
40 hrs No Buoyancy Separation
-0.4
+0.2
N.D.
-1.5
-0.0
buoyancy on lipid accumulation
40 hrs No Buoyancy Separation
+0.3
+0.2
N.D.
-1.4
-0.4
ypd buoyancy
40 hrs Low Buoyancy
-0.1
+0.1
N.D.
-0.5
-0.3
growth on oleic acid
YNB Oleic Acid
-0.0
-0.3
N.D.
-0.3
-0.1
buoyancy on lipid accumulation
40 hrs Low Buoyancy
+0.2
+0.2
N.D.
-0.4
-0.6
growth on oleic acid
YNB Glucose
-0.2
-0.2
N.D.
-0.1
-0.1
auxotrophy
YNB Glucose 75mM Arginine
+0.1
-0.1
N.D.
-0.3
+0.0
auxotrophy
YNB Glucose
+0.1
+0.1
N.D.
-0.3
-0.1
auxotrophy
YNB Glucose 75mM Methionine
+0.3
-0.2
N.D.
+0.0
-0.3
buoyancy on lipid accumulation
40 hrs High Buoyancy
+0.2
+0.2
N.D.
+0.1
-0.5
buoyancy on lipid accumulation
40 hrs Median Buoyancy
+0.1
+0.3
N.D.
-0.4
-0.1
growth on ricinoleic acid
YNB Methylricinoleic Acid
+0.2
-0.1
N.D.
+0.2
-0.2
ypd buoyancy
40 hrs Median Buoyancy
-0.1
+0.1
N.D.
+0.2
-0.0
ypd buoyancy
40 hrs High Buoyancy
-0.2
+0.1
N.D.
+0.3
+0.1
growth on ricinoleic acid
YNB Glucose
+0.3
+0.0
N.D.
+0.2
-0.1
facs on lipid accumulation
Sorted Low BODIPY Gate
-0.1
+0.3
N.D.
+0.1
-0.0
auxotrophy
Dropout Complete
+0.2
+0.2
N.D.
+0.0
+0.1
growth on ricinoleic acid
YNB Ricinoleic Acid
+0.2
+0.1
N.D.
+0.5
-0.0
facs on lipid accumulation
Sorted No BODIPY Gate
+0.2
+0.2
N.D.
+0.9
-0.1
growth on ypd
YPD
-0.1
+0.3
N.D.
+1.3
-0.1
facs on lipid accumulation
Sorted High BODIPY Gate
-0.1
+0.2
N.D.
+1.0
+0.4
remove
mRNA_1115
plot
remove
mRNA_1116
plot
remove
mRNA_1117
remove
mRNA_1118
plot
remove
mRNA_1119
plot