Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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500 nt 9484 and 9485 are separated by 132 nucleotides9485 and 9486 are separated by 456 nucleotides9486 and 9487 are separated by 677 nucleotides9487 and 9488 are separated by 571 nucleotides mRNA_1116: 9484 - KOG0255 Synaptic vesicle transporter SVOP and related transporters (major facilitator superfamily), at 441,335 to 443,528 9484 mRNA_1117: 9485 - K13102 KIN DNA/RNA-binding protein KIN17, at 443,661 to 444,962 9485 mRNA_1118: 9486 - HMMPfam-RTA1 like protein-PF04479, at 445,419 to 446,946 9486 mRNA_1119: 9487 - Hypothetical Protein, at 447,624 to 448,229 9487 mRNA_1120: 9488 - KOG1612 Exosomal 3'-5' exoribonuclease complex, subunit Rrp42, at 448,801 to 450,033 9488
Group Condition mRNA_1116 mRNA_1117 mRNA_1118 mRNA_1119 mRNA_1120
9484 9485 9486 9487 9488
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation +0.2 N.D. -1.4 -0.4 N.D.
ypd buoyancy 40 hrs No Buoyancy Separation +0.2 N.D. -1.5 -0.0 N.D.
buoyancy on lipid accumulation 40 hrs Low Buoyancy +0.2 N.D. -0.4 -0.6 N.D.
growth on oleic acid YNB Oleic Acid -0.3 N.D. -0.3 -0.1 N.D.
ypd buoyancy 40 hrs Low Buoyancy +0.1 N.D. -0.5 -0.3 N.D.
auxotrophy YNB Glucose 75mM Methionine -0.2 N.D. +0.0 -0.3 N.D.
growth on oleic acid YNB Glucose -0.2 N.D. -0.1 -0.1 N.D.
auxotrophy YNB Glucose 75mM Arginine -0.1 N.D. -0.3 +0.0 N.D.
auxotrophy YNB Glucose +0.1 N.D. -0.3 -0.1 N.D.
buoyancy on lipid accumulation 40 hrs High Buoyancy +0.2 N.D. +0.1 -0.5 N.D.
buoyancy on lipid accumulation 40 hrs Median Buoyancy +0.3 N.D. -0.4 -0.1 N.D.
growth on ricinoleic acid YNB Methylricinoleic Acid -0.1 N.D. +0.2 -0.2 N.D.
growth on ricinoleic acid YNB Glucose +0.0 N.D. +0.2 -0.1 N.D.
ypd buoyancy 40 hrs Median Buoyancy +0.1 N.D. +0.2 -0.0 N.D.
auxotrophy Dropout Complete +0.2 N.D. +0.0 +0.1 N.D.
facs on lipid accumulation Sorted Low BODIPY Gate +0.3 N.D. +0.1 -0.0 N.D.
ypd buoyancy 40 hrs High Buoyancy +0.1 N.D. +0.3 +0.1 N.D.
growth on ricinoleic acid YNB Ricinoleic Acid +0.1 N.D. +0.5 -0.0 N.D.
facs on lipid accumulation Sorted No BODIPY Gate +0.2 N.D. +0.9 -0.1 N.D.
growth on ypd YPD +0.3 N.D. +1.3 -0.1 N.D.
facs on lipid accumulation Sorted High BODIPY Gate +0.2 N.D. +1.0 +0.4 N.D.
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