Fitness Browser
Home
Find Gene
BLAST
Experiments
Organisms
Help
Gene
Fitness
Nearby
Cofit
Protein
Homologs
Fitness for 5 genes in
Rhodosporidium toruloides IFO0880
Add gene:
Go
Number of genes on each side:
1
2
3
4
5
Go
Top 21 experiments (either direction), sorted by average fitness
Or view
all 21 experiments
or
choose conditions
or try the
comparative fitness browser
500 nt
9488 and 9489 are separated by 149 nucleotides
9489 and 9490 are separated by 286 nucleotides
9490 and 9491 are separated by 271 nucleotides
9491 and 9492 are separated by 455 nucleotides
mRNA_1120: 9488 - KOG1612 Exosomal 3'-5' exoribonuclease complex, subunit Rrp42, at 448,801 to 450,033
9488
mRNA_1121: 9489 - K05389 KCNKF potassium channel subfamily K, other eukaryote, at 450,183 to 453,173
9489
mRNA_1122: 9490 - BLAST glycoside hydrolase family 28 protein [Tulasnella cal..., at 453,460 to 456,260
9490
mRNA_1123: 9491 - K00078 DHDH dihydrodiol dehydrogenase / D-xylose 1-dehydrogenase (NADP), at 456,532 to 457,918
9491
mRNA_1124: 9492 - K09613 COPS5, CSN5 COP9 signalosome complex subunit 5, at 458,374 to 459,990
9492
Group
Condition
mRNA
_1120
mRNA
_1121
mRNA
_1122
mRNA
_1123
mRNA
_1124
9488
9489
9490
9491
9492
ypd buoyancy
40 hrs No Buoyancy Separation
N.D.
-1.0
-0.3
-0.9
-1.2
facs on lipid accumulation
Sorted High BODIPY Gate
N.D.
+0.0
-1.4
+0.1
-1.0
growth on oleic acid
YNB Oleic Acid
N.D.
-0.2
-0.6
-0.6
-0.5
ypd buoyancy
40 hrs Median Buoyancy
N.D.
-0.4
+0.0
-0.2
-0.6
ypd buoyancy
40 hrs High Buoyancy
N.D.
-0.5
-0.1
-0.0
-0.4
ypd buoyancy
40 hrs Low Buoyancy
N.D.
-0.3
-0.2
-0.2
-0.1
facs on lipid accumulation
Sorted No BODIPY Gate
N.D.
-0.1
-0.2
+0.5
-1.0
growth on ricinoleic acid
YNB Ricinoleic Acid
N.D.
-0.3
+0.2
-0.1
-0.5
growth on ricinoleic acid
YNB Glucose
N.D.
-0.4
-0.1
+0.0
-0.0
growth on ypd
YPD
N.D.
-0.1
-0.1
-0.0
-0.2
growth on ricinoleic acid
YNB Methylricinoleic Acid
N.D.
+0.1
+0.3
+0.0
-0.7
growth on oleic acid
YNB Glucose
N.D.
+0.1
+0.2
-0.3
-0.2
auxotrophy
YNB Glucose
N.D.
+0.1
+0.3
-0.2
-0.3
buoyancy on lipid accumulation
40 hrs No Buoyancy Separation
N.D.
+0.0
+0.1
-0.4
+0.2
buoyancy on lipid accumulation
40 hrs Median Buoyancy
N.D.
+0.1
-0.2
+0.0
+0.0
auxotrophy
YNB Glucose 75mM Methionine
N.D.
+0.3
+0.4
+0.0
-0.5
buoyancy on lipid accumulation
40 hrs Low Buoyancy
N.D.
+0.0
+0.3
-0.2
+0.0
auxotrophy
Dropout Complete
N.D.
-0.1
+0.4
+0.0
+0.1
auxotrophy
YNB Glucose 75mM Arginine
N.D.
+0.1
+0.4
+0.3
-0.3
buoyancy on lipid accumulation
40 hrs High Buoyancy
N.D.
+0.4
-0.2
-0.4
+0.7
facs on lipid accumulation
Sorted Low BODIPY Gate
N.D.
-0.2
+1.0
+0.6
+0.3
remove
mRNA_1120
plot
remove
mRNA_1121
plot
remove
mRNA_1122
remove
mRNA_1123
plot
remove
mRNA_1124
plot