Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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500 nt 9488 and 9489 are separated by 149 nucleotides9489 and 9490 are separated by 286 nucleotides9490 and 9491 are separated by 271 nucleotides9491 and 9492 are separated by 455 nucleotides mRNA_1120: 9488 - KOG1612 Exosomal 3'-5' exoribonuclease complex, subunit Rrp42, at 448,801 to 450,033 9488 mRNA_1121: 9489 - K05389 KCNKF potassium channel subfamily K, other eukaryote, at 450,183 to 453,173 9489 mRNA_1122: 9490 - BLAST glycoside hydrolase family 28 protein [Tulasnella cal..., at 453,460 to 456,260 9490 mRNA_1123: 9491 - K00078 DHDH dihydrodiol dehydrogenase / D-xylose 1-dehydrogenase (NADP), at 456,532 to 457,918 9491 mRNA_1124: 9492 - K09613 COPS5, CSN5 COP9 signalosome complex subunit 5, at 458,374 to 459,990 9492
Group Condition mRNA_1120 mRNA_1121 mRNA_1122 mRNA_1123 mRNA_1124
9488 9489 9490 9491 9492
ypd buoyancy 40 hrs No Buoyancy Separation N.D. -1.0 -0.3 -0.9 -1.2
facs on lipid accumulation Sorted High BODIPY Gate N.D. +0.0 -1.4 +0.1 -1.0
growth on oleic acid YNB Oleic Acid N.D. -0.2 -0.6 -0.6 -0.5
ypd buoyancy 40 hrs Median Buoyancy N.D. -0.4 +0.0 -0.2 -0.6
ypd buoyancy 40 hrs High Buoyancy N.D. -0.5 -0.1 -0.0 -0.4
ypd buoyancy 40 hrs Low Buoyancy N.D. -0.3 -0.2 -0.2 -0.1
facs on lipid accumulation Sorted No BODIPY Gate N.D. -0.1 -0.2 +0.5 -1.0
growth on ricinoleic acid YNB Ricinoleic Acid N.D. -0.3 +0.2 -0.1 -0.5
growth on ricinoleic acid YNB Glucose N.D. -0.4 -0.1 +0.0 -0.0
growth on ypd YPD N.D. -0.1 -0.1 -0.0 -0.2
growth on ricinoleic acid YNB Methylricinoleic Acid N.D. +0.1 +0.3 +0.0 -0.7
growth on oleic acid YNB Glucose N.D. +0.1 +0.2 -0.3 -0.2
auxotrophy YNB Glucose N.D. +0.1 +0.3 -0.2 -0.3
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation N.D. +0.0 +0.1 -0.4 +0.2
buoyancy on lipid accumulation 40 hrs Median Buoyancy N.D. +0.1 -0.2 +0.0 +0.0
auxotrophy YNB Glucose 75mM Methionine N.D. +0.3 +0.4 +0.0 -0.5
buoyancy on lipid accumulation 40 hrs Low Buoyancy N.D. +0.0 +0.3 -0.2 +0.0
auxotrophy Dropout Complete N.D. -0.1 +0.4 +0.0 +0.1
auxotrophy YNB Glucose 75mM Arginine N.D. +0.1 +0.4 +0.3 -0.3
buoyancy on lipid accumulation 40 hrs High Buoyancy N.D. +0.4 -0.2 -0.4 +0.7
facs on lipid accumulation Sorted Low BODIPY Gate N.D. -0.2 +1.0 +0.6 +0.3
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