Fitness for 5 genes in Rhodosporidium toruloides IFO0880

Add gene:

Number of genes on each side:  

Top 21 experiments (either direction), sorted by average fitness

Or view all 21 experiments or choose conditions or try the comparative fitness browser

500 nt 9491 and 9492 are separated by 455 nucleotides9492 and 9493 are separated by 325 nucleotides9493 and 9494 are separated by 346 nucleotides9494 and 9495 are separated by 283 nucleotides mRNA_1123: 9491 - K00078 DHDH dihydrodiol dehydrogenase / D-xylose 1-dehydrogenase (NADP), at 456,532 to 457,918 9491 mRNA_1124: 9492 - K09613 COPS5, CSN5 COP9 signalosome complex subunit 5, at 458,374 to 459,990 9492 mRNA_1125: 9493 - K20465 OSBPL9_10_11, ORP9_10_11 oxysterol-binding protein-related protein 9/10/11, at 460,316 to 462,771 9493 mRNA_1126: 9494 - K15334 NCL1, TRM4 multisite-specific tRNA-(cytosine-C5)-methyltransferase, at 463,118 to 466,210 9494 mRNA_1127: 9495 - K00143 LYS2 L-aminoadipate-semialdehyde dehydrogenase, at 466,494 to 471,179 9495
Group Condition mRNA_1123 mRNA_1124 mRNA_1125 mRNA_1126 mRNA_1127
9491 9492 9493 9494 9495
facs on lipid accumulation Sorted High BODIPY Gate +0.1 -1.0 -0.5 -1.9 -1.6
facs on lipid accumulation Sorted No BODIPY Gate +0.5 -1.0 -0.1 -1.1 -1.0
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation -0.4 +0.2 -0.7 -0.3 -1.2
buoyancy on lipid accumulation 40 hrs Low Buoyancy -0.2 +0.0 -0.3 -0.4 -1.4
buoyancy on lipid accumulation 40 hrs Median Buoyancy +0.0 +0.0 -0.3 -0.5 -1.5
growth on oleic acid YNB Oleic Acid -0.6 -0.5 -0.1 +0.4 -1.3
growth on oleic acid YNB Glucose -0.3 -0.2 -0.3 -0.1 -1.2
ypd buoyancy 40 hrs No Buoyancy Separation -0.9 -1.2 +0.3 +0.5 -0.4
facs on lipid accumulation Sorted Low BODIPY Gate +0.6 +0.3 -0.2 -0.7 -1.7
buoyancy on lipid accumulation 40 hrs High Buoyancy -0.4 +0.7 -0.2 -0.2 -1.6
growth on ricinoleic acid YNB Glucose +0.0 -0.0 -0.1 +0.7 -2.1
auxotrophy YNB Glucose 75mM Methionine +0.0 -0.5 +0.2 +0.6 -1.7
growth on ricinoleic acid YNB Ricinoleic Acid -0.1 -0.5 -0.2 +1.1 -1.7
growth on ricinoleic acid YNB Methylricinoleic Acid +0.0 -0.7 -0.2 +0.8 -1.3
auxotrophy YNB Glucose 75mM Arginine +0.3 -0.3 +0.2 +0.2 -1.5
auxotrophy YNB Glucose -0.2 -0.3 +0.2 +0.7 -1.6
ypd buoyancy 40 hrs High Buoyancy -0.0 -0.4 -0.0 +0.1 -0.6
auxotrophy Dropout Complete +0.0 +0.1 +0.2 +0.1 -1.3
ypd buoyancy 40 hrs Median Buoyancy -0.2 -0.6 +0.4 -0.3 +0.1
growth on ypd YPD -0.0 -0.2 +0.4 -0.2 +0.0
ypd buoyancy 40 hrs Low Buoyancy -0.2 -0.1 +0.2 +0.4 -0.1
remove
mRNA_1123
plot
remove
mRNA_1124
plot
remove
mRNA_1125
remove
mRNA_1126
plot
remove
mRNA_1127
plot