Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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500 nt 9495 and 9496 are separated by 173 nucleotides9496 and 9497 are separated by 167 nucleotides9497 and 9498 are separated by 701 nucleotides9498 and 9499 are separated by 298 nucleotides mRNA_1127: 9495 - K00143 LYS2 L-aminoadipate-semialdehyde dehydrogenase, at 466,494 to 471,179 9495 mRNA_1128: 9496 - Interpro Arrestin (or S-antigen), N-terminal domain 0, at 471,353 to 475,855 9496 mRNA_1129: 9497 - K12391 AP1G1 AP-1 complex subunit gamma-1, at 476,023 to 479,289 9497 mRNA_1130: 9498 - KOG1773 Stress responsive protein, at 479,991 to 480,650 9498 mRNA_1131: 9499 - K01758 CTH cystathionine gamma-lyase, at 480,949 to 482,653 9499
Group Condition mRNA_1127 mRNA_1128 mRNA_1129 mRNA_1130 mRNA_1131
9495 9496 9497 9498 9499
ypd buoyancy 40 hrs No Buoyancy Separation -0.4 -0.1 -2.6 -2.1 +0.3
facs on lipid accumulation Sorted Low BODIPY Gate -1.7 +0.1 -0.4 -1.8 -0.2
facs on lipid accumulation Sorted High BODIPY Gate -1.6 -0.1 -1.4 +0.2 -0.5
facs on lipid accumulation Sorted No BODIPY Gate -1.0 -0.1 -0.6 -0.7 +0.1
growth on ricinoleic acid YNB Ricinoleic Acid -1.7 -0.0 +1.0 -0.6 -0.5
auxotrophy YNB Glucose 75mM Methionine -1.7 -0.1 +0.6 -0.4 -0.1
growth on oleic acid YNB Oleic Acid -1.3 +0.0 +0.3 -0.1 -0.4
growth on oleic acid YNB Glucose -1.2 +0.1 -0.0 +0.1 -0.2
auxotrophy YNB Glucose 75mM Arginine -1.5 -0.1 +0.5 -0.2 +0.2
auxotrophy YNB Glucose -1.6 -0.0 +0.3 +0.3 -0.0
growth on ricinoleic acid YNB Glucose -2.1 -0.1 +0.3 +0.8 +0.3
ypd buoyancy 40 hrs High Buoyancy -0.6 +0.2 +0.2 -0.3 -0.2
growth on ypd YPD +0.0 -0.1 +0.5 -1.4 +0.2
ypd buoyancy 40 hrs Median Buoyancy +0.1 +0.1 +0.2 -1.0 +0.0
auxotrophy Dropout Complete -1.3 +0.1 +0.6 +0.7 +0.1
ypd buoyancy 40 hrs Low Buoyancy -0.1 +0.1 +0.5 +0.1 +0.2
growth on ricinoleic acid YNB Methylricinoleic Acid -1.3 +0.2 +1.6 +0.7 -0.1
buoyancy on lipid accumulation 40 hrs Median Buoyancy -1.5 -0.1 -0.0 +2.8 +0.1
buoyancy on lipid accumulation 40 hrs Low Buoyancy -1.4 -0.1 +0.2 +3.4 -0.1
buoyancy on lipid accumulation 40 hrs High Buoyancy -1.6 +0.0 +0.3 +3.7 -0.3
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation -1.2 +0.0 +0.6 +3.6 -0.0
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