Fitness for 5 genes in Rhodosporidium toruloides IFO0880

Add gene:

Number of genes on each side:  

Top 21 experiments (either direction), sorted by average fitness

Or view all 21 experiments or choose conditions or try the comparative fitness browser

500 nt 9496 and 9497 are separated by 167 nucleotides9497 and 9498 are separated by 701 nucleotides9498 and 9499 are separated by 298 nucleotides9499 and 9500 are separated by 368 nucleotides mRNA_1128: 9496 - Interpro Arrestin (or S-antigen), N-terminal domain 0, at 471,353 to 475,855 9496 mRNA_1129: 9497 - K12391 AP1G1 AP-1 complex subunit gamma-1, at 476,023 to 479,289 9497 mRNA_1130: 9498 - KOG1773 Stress responsive protein, at 479,991 to 480,650 9498 mRNA_1131: 9499 - K01758 CTH cystathionine gamma-lyase, at 480,949 to 482,653 9499 mRNA_1132: 9500 - K20362 YIF1 protein transport protein YIF1, at 483,022 to 484,511 9500
Group Condition mRNA_1128 mRNA_1129 mRNA_1130 mRNA_1131 mRNA_1132
9496 9497 9498 9499 9500
ypd buoyancy 40 hrs No Buoyancy Separation -0.1 -2.6 -2.1 +0.3 N.D.
facs on lipid accumulation Sorted Low BODIPY Gate +0.1 -0.4 -1.8 -0.2 N.D.
facs on lipid accumulation Sorted High BODIPY Gate -0.1 -1.4 +0.2 -0.5 N.D.
facs on lipid accumulation Sorted No BODIPY Gate -0.1 -0.6 -0.7 +0.1 N.D.
ypd buoyancy 40 hrs Median Buoyancy +0.1 +0.2 -1.0 +0.0 N.D.
growth on ypd YPD -0.1 +0.5 -1.4 +0.2 N.D.
growth on oleic acid YNB Oleic Acid +0.0 +0.3 -0.1 -0.4 N.D.
ypd buoyancy 40 hrs High Buoyancy +0.2 +0.2 -0.3 -0.2 N.D.
growth on ricinoleic acid YNB Ricinoleic Acid -0.0 +1.0 -0.6 -0.5 N.D.
growth on oleic acid YNB Glucose +0.1 -0.0 +0.1 -0.2 N.D.
auxotrophy YNB Glucose 75mM Methionine -0.1 +0.6 -0.4 -0.1 N.D.
auxotrophy YNB Glucose 75mM Arginine -0.1 +0.5 -0.2 +0.2 N.D.
auxotrophy YNB Glucose -0.0 +0.3 +0.3 -0.0 N.D.
ypd buoyancy 40 hrs Low Buoyancy +0.1 +0.5 +0.1 +0.2 N.D.
growth on ricinoleic acid YNB Glucose -0.1 +0.3 +0.8 +0.3 N.D.
auxotrophy Dropout Complete +0.1 +0.6 +0.7 +0.1 N.D.
growth on ricinoleic acid YNB Methylricinoleic Acid +0.2 +1.6 +0.7 -0.1 N.D.
buoyancy on lipid accumulation 40 hrs Median Buoyancy -0.1 -0.0 +2.8 +0.1 N.D.
buoyancy on lipid accumulation 40 hrs Low Buoyancy -0.1 +0.2 +3.4 -0.1 N.D.
buoyancy on lipid accumulation 40 hrs High Buoyancy +0.0 +0.3 +3.7 -0.3 N.D.
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation +0.0 +0.6 +3.6 -0.0 N.D.
remove
mRNA_1128
plot
remove
mRNA_1129
plot
remove
mRNA_1130
remove
mRNA_1131
plot
remove
mRNA_1132
plot