Fitness Browser
Home
Find Gene
BLAST
Experiments
Organisms
Help
Gene
Fitness
Nearby
Cofit
Protein
Homologs
Fitness for 5 genes in
Rhodosporidium toruloides IFO0880
Add gene:
Go
Number of genes on each side:
1
2
3
4
5
Go
Top 21 experiments (either direction), sorted by average fitness
Or view
all 21 experiments
or
choose conditions
or try the
comparative fitness browser
500 nt
9498 and 9499 are separated by 298 nucleotides
9499 and 9500 are separated by 368 nucleotides
9500 and 9501 are separated by 627 nucleotides
9501 and 9502 are separated by 353 nucleotides
mRNA_1130: 9498 - KOG1773 Stress responsive protein, at 479,991 to 480,650
9498
mRNA_1131: 9499 - K01758 CTH cystathionine gamma-lyase, at 480,949 to 482,653
9499
mRNA_1132: 9500 - K20362 YIF1 protein transport protein YIF1, at 483,022 to 484,511
9500
mRNA_1133: 9501 - Hypothetical Protein, at 485,139 to 486,293
9501
mRNA_1134: 9502 - K10685 UBLE1B, SAE2, UBA2 ubiquitin-like 1-activating enzyme E1 B, at 486,647 to 489,747
9502
Group
Condition
mRNA
_1130
mRNA
_1131
mRNA
_1132
mRNA
_1133
mRNA
_1134
9498
9499
9500
9501
9502
facs on lipid accumulation
Sorted Low BODIPY Gate
-1.8
-0.2
N.D.
-0.5
-4.6
facs on lipid accumulation
Sorted High BODIPY Gate
+0.2
-0.5
N.D.
-0.2
-3.7
facs on lipid accumulation
Sorted No BODIPY Gate
-0.7
+0.1
N.D.
-0.0
-3.1
growth on ypd
YPD
-1.4
+0.2
N.D.
-0.2
-0.5
ypd buoyancy
40 hrs No Buoyancy Separation
-2.1
+0.3
N.D.
+0.1
+0.2
ypd buoyancy
40 hrs Median Buoyancy
-1.0
+0.0
N.D.
-0.0
-0.3
ypd buoyancy
40 hrs High Buoyancy
-0.3
-0.2
N.D.
-0.3
+0.2
auxotrophy
YNB Glucose 75mM Methionine
-0.4
-0.1
N.D.
-0.2
+0.3
growth on oleic acid
YNB Glucose
+0.1
-0.2
N.D.
+0.1
+0.5
auxotrophy
YNB Glucose
+0.3
-0.0
N.D.
-0.0
+0.4
auxotrophy
YNB Glucose 75mM Arginine
-0.2
+0.2
N.D.
-0.1
+0.7
auxotrophy
Dropout Complete
+0.7
+0.1
N.D.
-0.2
+0.2
growth on oleic acid
YNB Oleic Acid
-0.1
-0.4
N.D.
+0.2
+1.8
growth on ricinoleic acid
YNB Glucose
+0.8
+0.3
N.D.
-0.1
+0.5
growth on ricinoleic acid
YNB Ricinoleic Acid
-0.6
-0.5
N.D.
+0.1
+2.5
ypd buoyancy
40 hrs Low Buoyancy
+0.1
+0.2
N.D.
+0.0
+1.7
growth on ricinoleic acid
YNB Methylricinoleic Acid
+0.7
-0.1
N.D.
+0.0
+1.8
buoyancy on lipid accumulation
40 hrs Median Buoyancy
+2.8
+0.1
N.D.
-0.1
-0.2
buoyancy on lipid accumulation
40 hrs No Buoyancy Separation
+3.6
-0.0
N.D.
-0.2
+0.5
buoyancy on lipid accumulation
40 hrs High Buoyancy
+3.7
-0.3
N.D.
-0.3
+1.3
buoyancy on lipid accumulation
40 hrs Low Buoyancy
+3.4
-0.1
N.D.
+0.0
+1.4
remove
mRNA_1130
plot
remove
mRNA_1131
plot
remove
mRNA_1132
remove
mRNA_1133
plot
remove
mRNA_1134
plot