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Protein
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Fitness for 5 genes in
Rhodosporidium toruloides IFO0880
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Top 21 experiments (either direction), sorted by average fitness
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500 nt
9500 and 9501 are separated by 627 nucleotides
9501 and 9502 are separated by 353 nucleotides
9502 and 9503 are separated by 80 nucleotides
9503 and 9504 are separated by 164 nucleotides
mRNA_1132: 9500 - K20362 YIF1 protein transport protein YIF1, at 483,022 to 484,511
9500
mRNA_1133: 9501 - Hypothetical Protein, at 485,139 to 486,293
9501
mRNA_1134: 9502 - K10685 UBLE1B, SAE2, UBA2 ubiquitin-like 1-activating enzyme E1 B, at 486,647 to 489,747
9502
mRNA_1135: 9503 - K04532 NAE1, APPBP1 amyloid beta precursor protein binding protein 1, at 489,828 to 492,159
9503
mRNA_1136: 9504 - Hypothetical Protein, at 492,324 to 493,013
9504
Group
Condition
mRNA
_1132
mRNA
_1133
mRNA
_1134
mRNA
_1135
mRNA
_1136
9500
9501
9502
9503
9504
facs on lipid accumulation
Sorted Low BODIPY Gate
N.D.
-0.5
-4.6
N.D.
-0.4
facs on lipid accumulation
Sorted High BODIPY Gate
N.D.
-0.2
-3.7
N.D.
+0.1
facs on lipid accumulation
Sorted No BODIPY Gate
N.D.
-0.0
-3.1
N.D.
+0.1
ypd buoyancy
40 hrs No Buoyancy Separation
N.D.
+0.1
+0.2
N.D.
-1.1
growth on ypd
YPD
N.D.
-0.2
-0.5
N.D.
-0.0
buoyancy on lipid accumulation
40 hrs Median Buoyancy
N.D.
-0.1
-0.2
N.D.
-0.2
ypd buoyancy
40 hrs Median Buoyancy
N.D.
-0.0
-0.3
N.D.
-0.2
ypd buoyancy
40 hrs High Buoyancy
N.D.
-0.3
+0.2
N.D.
-0.1
auxotrophy
YNB Glucose 75mM Methionine
N.D.
-0.2
+0.3
N.D.
+0.1
growth on ricinoleic acid
YNB Glucose
N.D.
-0.1
+0.5
N.D.
-0.1
buoyancy on lipid accumulation
40 hrs No Buoyancy Separation
N.D.
-0.2
+0.5
N.D.
+0.0
auxotrophy
YNB Glucose
N.D.
-0.0
+0.4
N.D.
+0.1
auxotrophy
Dropout Complete
N.D.
-0.2
+0.2
N.D.
+0.5
growth on oleic acid
YNB Glucose
N.D.
+0.1
+0.5
N.D.
-0.1
auxotrophy
YNB Glucose 75mM Arginine
N.D.
-0.1
+0.7
N.D.
+0.4
buoyancy on lipid accumulation
40 hrs High Buoyancy
N.D.
-0.3
+1.3
N.D.
+0.2
buoyancy on lipid accumulation
40 hrs Low Buoyancy
N.D.
+0.0
+1.4
N.D.
+0.1
ypd buoyancy
40 hrs Low Buoyancy
N.D.
+0.0
+1.7
N.D.
-0.0
growth on ricinoleic acid
YNB Methylricinoleic Acid
N.D.
+0.0
+1.8
N.D.
+0.3
growth on oleic acid
YNB Oleic Acid
N.D.
+0.2
+1.8
N.D.
+0.2
growth on ricinoleic acid
YNB Ricinoleic Acid
N.D.
+0.1
+2.5
N.D.
+0.5
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