Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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500 nt 9504 and 9505 are separated by 419 nucleotides9505 and 9506 are separated by 462 nucleotides9506 and 9507 are separated by 556 nucleotides9507 and 9508 overlap by 9 nucleotides mRNA_1136: 9504 - Hypothetical Protein, at 492,324 to 493,013 9504 mRNA_1137: 9505 - KOG2363 Protein subunit of nuclear ribonuclease P (RNase P), at 493,433 to 494,833 9505 mRNA_1138: 9506 - K12598 MTR4, SKIV2L2 ATP-dependent RNA helicase DOB1, at 495,296 to 498,898 9506 mRNA_1139: 9507 - KOG0948 Nuclear exosomal RNA helicase MTR4, DEAD-box superfamily, at 499,455 to 501,152 9507 mRNA_1140: 9508 - Hypothetical Protein, at 501,144 to 502,364 9508
Group Condition mRNA_1136 mRNA_1137 mRNA_1138 mRNA_1139 mRNA_1140
9504 9505 9506 9507 9508
ypd buoyancy 40 hrs No Buoyancy Separation -1.1 N.D. N.D. -0.7 -0.2
buoyancy on lipid accumulation 40 hrs High Buoyancy +0.2 N.D. N.D. -1.4 -0.3
ypd buoyancy 40 hrs High Buoyancy -0.1 N.D. N.D. -1.2 -0.1
ypd buoyancy 40 hrs Median Buoyancy -0.2 N.D. N.D. -0.3 -0.2
facs on lipid accumulation Sorted Low BODIPY Gate -0.4 N.D. N.D. +0.1 -0.4
ypd buoyancy 40 hrs Low Buoyancy -0.0 N.D. N.D. -0.4 -0.2
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation +0.0 N.D. N.D. -0.5 -0.0
growth on oleic acid YNB Glucose -0.1 N.D. N.D. -0.3 -0.1
growth on oleic acid YNB Oleic Acid +0.2 N.D. N.D. -0.1 -0.1
buoyancy on lipid accumulation 40 hrs Median Buoyancy -0.2 N.D. N.D. +0.3 +0.0
facs on lipid accumulation Sorted No BODIPY Gate +0.1 N.D. N.D. +0.4 -0.2
auxotrophy YNB Glucose 75mM Methionine +0.1 N.D. N.D. +0.1 +0.1
growth on ricinoleic acid YNB Glucose -0.1 N.D. N.D. +0.5 +0.1
facs on lipid accumulation Sorted High BODIPY Gate +0.1 N.D. N.D. +0.5 -0.2
growth on ricinoleic acid YNB Methylricinoleic Acid +0.3 N.D. N.D. +0.3 +0.1
auxotrophy YNB Glucose 75mM Arginine +0.4 N.D. N.D. +0.1 +0.2
buoyancy on lipid accumulation 40 hrs Low Buoyancy +0.1 N.D. N.D. +0.5 +0.2
auxotrophy YNB Glucose +0.1 N.D. N.D. +0.3 +0.4
auxotrophy Dropout Complete +0.5 N.D. N.D. +0.5 +0.3
growth on ricinoleic acid YNB Ricinoleic Acid +0.5 N.D. N.D. +0.9 +0.0
growth on ypd YPD -0.0 N.D. N.D. +2.0 +0.2
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