Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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500 nt 9508 and 9509 are separated by 241 nucleotides9509 and 9510 are separated by 132 nucleotides9510 and 9511 are separated by 362 nucleotides9511 and 9512 are separated by 104 nucleotides mRNA_1140: 9508 - Hypothetical Protein, at 501,144 to 502,364 9508 mRNA_1141: 9509 - ProSiteProfiles-Prokaryotic membrane lipoprotein lipid attachment site profile.-PS51257, at 502,606 to 503,454 9509 mRNA_1142: 9510 - K03139 TFIIF2, GTF2F2, TFG2 transcription initiation factor TFIIF subunit beta, at 503,587 to 505,304 9510 mRNA_1143: 9511 - HMMPfam-Fungal Zn(2)-Cys(6) binuclear cluster domain-PF00172,ProSitePatterns-Zn(2)-C6 fungal-type DNA-binding domain signature.-PS00463,ProSiteProfiles-Zn(2)-C6 fungal-type DNA-binding domain profile.-PS50048,SMART-GAL4-like Zn(II)2Cys6 (or C6 zinc) binuclear cluster DNA-binding domain-SM00066,SUPERFAMILY--SSF57701, at 505,667 to 510,461 9511 mRNA_1144: 9512 - K13355 NUDT19 nucleoside diphosphate-linked moiety X motif 19, mitochondrial, at 510,566 to 511,961 9512
Group Condition mRNA_1140 mRNA_1141 mRNA_1142 mRNA_1143 mRNA_1144
9508 9509 9510 9511 9512
ypd buoyancy 40 hrs No Buoyancy Separation -0.2 -1.3 N.D. -0.0 -0.9
auxotrophy YNB Glucose 75mM Methionine +0.1 -1.2 N.D. -0.1 -0.4
facs on lipid accumulation Sorted Low BODIPY Gate -0.4 -0.8 N.D. +0.1 -0.1
auxotrophy YNB Glucose 75mM Arginine +0.2 -1.0 N.D. -0.1 -0.1
growth on oleic acid YNB Oleic Acid -0.1 -0.3 N.D. -0.3 -0.2
growth on oleic acid YNB Glucose -0.1 -0.4 N.D. -0.2 -0.1
ypd buoyancy 40 hrs Low Buoyancy -0.2 -0.2 N.D. -0.2 -0.2
ypd buoyancy 40 hrs High Buoyancy -0.1 -0.5 N.D. -0.1 -0.1
auxotrophy Dropout Complete +0.3 -0.4 N.D. -0.2 -0.2
ypd buoyancy 40 hrs Median Buoyancy -0.2 +0.1 N.D. -0.1 -0.1
auxotrophy YNB Glucose +0.4 -0.3 N.D. -0.0 -0.2
growth on ricinoleic acid YNB Methylricinoleic Acid +0.1 -0.2 N.D. -0.1 +0.3
growth on ricinoleic acid YNB Ricinoleic Acid +0.0 -0.6 N.D. +0.0 +0.6
buoyancy on lipid accumulation 40 hrs High Buoyancy -0.3 +0.2 N.D. +0.1 +0.5
growth on ricinoleic acid YNB Glucose +0.1 +0.2 N.D. +0.0 +0.4
facs on lipid accumulation Sorted No BODIPY Gate -0.2 +0.8 N.D. -0.0 +0.0
facs on lipid accumulation Sorted High BODIPY Gate -0.2 +0.7 N.D. -0.1 +0.2
growth on ypd YPD +0.2 +0.8 N.D. -0.1 -0.0
buoyancy on lipid accumulation 40 hrs Median Buoyancy +0.0 +0.5 N.D. +0.0 +0.5
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation -0.0 +0.9 N.D. -0.0 +0.5
buoyancy on lipid accumulation 40 hrs Low Buoyancy +0.2 +0.7 N.D. +0.1 +0.6
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