Fitness Browser
Home
Find Gene
BLAST
Experiments
Organisms
Help
Gene
Fitness
Nearby
Cofit
Protein
Homologs
Fitness for 5 genes in
Rhodosporidium toruloides IFO0880
Add gene:
Go
Number of genes on each side:
1
2
3
4
5
Go
Top 21 experiments (either direction), sorted by average fitness
Or view
all 21 experiments
or
choose conditions
or try the
comparative fitness browser
500 nt
9512 and 9513 are separated by 772 nucleotides
9513 and 9514 are separated by 449 nucleotides
9514 and 9515 are separated by 294 nucleotides
9515 and 9516 are separated by 459 nucleotides
mRNA_1144: 9512 - K13355 NUDT19 nucleoside diphosphate-linked moiety X motif 19, mitochondrial, at 510,566 to 511,961
9512
mRNA_1145: 9513 - K00669 AANAT arylalkylamine N-acetyltransferase, at 512,734 to 513,942
9513
mRNA_1146: 9514 - K06682 TEM1 Gtp-binding protein of the ras superfamily involved in termination of M-phase, at 514,392 to 515,549
9514
mRNA_1147: 9515 - KOG0069 Glyoxylate/hydroxypyruvate reductase (D-isomer-specific 2-hydroxy acid dehydrogenase superfamily), at 515,844 to 517,256
9515
mRNA_1148: 9516 - K02923 RP-L38e, RPL38 large subunit ribosomal protein L38e, at 517,716 to 518,527
9516
Group
Condition
mRNA
_1144
mRNA
_1145
mRNA
_1146
mRNA
_1147
mRNA
_1148
9512
9513
9514
9515
9516
ypd buoyancy
40 hrs No Buoyancy Separation
-0.9
-0.3
-0.3
-0.5
N.D.
ypd buoyancy
40 hrs Low Buoyancy
-0.2
-0.3
-0.0
-0.1
N.D.
ypd buoyancy
40 hrs Median Buoyancy
-0.1
-0.1
-0.1
-0.3
N.D.
buoyancy on lipid accumulation
40 hrs No Buoyancy Separation
+0.5
-0.4
-0.0
-0.6
N.D.
buoyancy on lipid accumulation
40 hrs High Buoyancy
+0.5
-0.2
-0.2
-0.5
N.D.
facs on lipid accumulation
Sorted No BODIPY Gate
+0.0
-0.5
+0.2
+0.0
N.D.
growth on oleic acid
YNB Oleic Acid
-0.2
-0.0
-0.2
+0.2
N.D.
auxotrophy
YNB Glucose 75mM Methionine
-0.4
+0.3
-0.3
+0.3
N.D.
growth on oleic acid
YNB Glucose
-0.1
+0.3
-0.4
+0.1
N.D.
ypd buoyancy
40 hrs High Buoyancy
-0.1
-0.2
+0.3
-0.1
N.D.
facs on lipid accumulation
Sorted Low BODIPY Gate
-0.1
-0.8
+0.5
+0.3
N.D.
growth on ricinoleic acid
YNB Glucose
+0.4
-0.3
-0.3
+0.2
N.D.
facs on lipid accumulation
Sorted High BODIPY Gate
+0.2
-0.3
-0.0
+0.2
N.D.
buoyancy on lipid accumulation
40 hrs Low Buoyancy
+0.6
+0.0
-0.2
-0.4
N.D.
growth on ypd
YPD
-0.0
+0.0
+0.6
-0.4
N.D.
buoyancy on lipid accumulation
40 hrs Median Buoyancy
+0.5
+0.1
-0.1
-0.2
N.D.
auxotrophy
YNB Glucose 75mM Arginine
-0.1
+0.5
-0.2
+0.1
N.D.
auxotrophy
YNB Glucose
-0.2
+0.2
+0.1
+0.2
N.D.
growth on ricinoleic acid
YNB Methylricinoleic Acid
+0.3
+0.1
-0.2
+0.4
N.D.
auxotrophy
Dropout Complete
-0.2
+0.8
-0.1
+0.0
N.D.
growth on ricinoleic acid
YNB Ricinoleic Acid
+0.6
+0.5
+0.3
-0.2
N.D.
remove
mRNA_1144
plot
remove
mRNA_1145
plot
remove
mRNA_1146
remove
mRNA_1147
plot
remove
mRNA_1148
plot