Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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500 nt 9513 and 9514 are separated by 449 nucleotides9514 and 9515 are separated by 294 nucleotides9515 and 9516 are separated by 459 nucleotides9516 and 9517 are separated by 701 nucleotides mRNA_1145: 9513 - K00669 AANAT arylalkylamine N-acetyltransferase, at 512,734 to 513,942 9513 mRNA_1146: 9514 - K06682 TEM1 Gtp-binding protein of the ras superfamily involved in termination of M-phase, at 514,392 to 515,549 9514 mRNA_1147: 9515 - KOG0069 Glyoxylate/hydroxypyruvate reductase (D-isomer-specific 2-hydroxy acid dehydrogenase superfamily), at 515,844 to 517,256 9515 mRNA_1148: 9516 - K02923 RP-L38e, RPL38 large subunit ribosomal protein L38e, at 517,716 to 518,527 9516 mRNA_1149: 9517 - Hypothetical Protein, at 519,229 to 520,018 9517
Group Condition mRNA_1145 mRNA_1146 mRNA_1147 mRNA_1148 mRNA_1149
9513 9514 9515 9516 9517
ypd buoyancy 40 hrs No Buoyancy Separation -0.3 -0.3 -0.5 N.D. -1.1
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation -0.4 -0.0 -0.6 N.D. -0.2
buoyancy on lipid accumulation 40 hrs High Buoyancy -0.2 -0.2 -0.5 N.D. -0.1
ypd buoyancy 40 hrs Low Buoyancy -0.3 -0.0 -0.1 N.D. -0.5
facs on lipid accumulation Sorted High BODIPY Gate -0.3 -0.0 +0.2 N.D. -0.5
facs on lipid accumulation Sorted No BODIPY Gate -0.5 +0.2 +0.0 N.D. -0.3
ypd buoyancy 40 hrs Median Buoyancy -0.1 -0.1 -0.3 N.D. -0.1
facs on lipid accumulation Sorted Low BODIPY Gate -0.8 +0.5 +0.3 N.D. -0.4
ypd buoyancy 40 hrs High Buoyancy -0.2 +0.3 -0.1 N.D. -0.3
buoyancy on lipid accumulation 40 hrs Low Buoyancy +0.0 -0.2 -0.4 N.D. +0.3
growth on ricinoleic acid YNB Glucose -0.3 -0.3 +0.2 N.D. +0.3
growth on ypd YPD +0.0 +0.6 -0.4 N.D. -0.3
buoyancy on lipid accumulation 40 hrs Median Buoyancy +0.1 -0.1 -0.2 N.D. +0.2
growth on oleic acid YNB Glucose +0.3 -0.4 +0.1 N.D. +0.0
auxotrophy YNB Glucose 75mM Methionine +0.3 -0.3 +0.3 N.D. -0.2
growth on oleic acid YNB Oleic Acid -0.0 -0.2 +0.2 N.D. +0.2
auxotrophy YNB Glucose +0.2 +0.1 +0.2 N.D. +0.1
growth on ricinoleic acid YNB Methylricinoleic Acid +0.1 -0.2 +0.4 N.D. +0.4
auxotrophy YNB Glucose 75mM Arginine +0.5 -0.2 +0.1 N.D. +0.3
growth on ricinoleic acid YNB Ricinoleic Acid +0.5 +0.3 -0.2 N.D. +0.5
auxotrophy Dropout Complete +0.8 -0.1 +0.0 N.D. +0.3
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