Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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500 nt 9518 and 9519 are separated by 940 nucleotides9519 and 9520 are separated by 537 nucleotides9520 and 9521 are separated by 108 nucleotides9521 and 9522 are separated by 492 nucleotides mRNA_1150: 9518 - Hypothetical Protein, at 520,283 to 520,867 9518 mRNA_1151: 9519 - Hypothetical Protein, at 521,808 to 522,539 9519 mRNA_1152: 9520 - KOG0069 Glyoxylate/hydroxypyruvate reductase (D-isomer-specific 2-hydroxy acid dehydrogenase superfamily), at 523,077 to 524,441 9520 mRNA_1153: 9521 - K13513 LCLAT1, AGPAT8 lysocardiolipin and lysophospholipid acyltransferase, at 524,550 to 526,104 9521 mRNA_1154: 9522 - Hypothetical Protein, at 526,597 to 527,643 9522
Group Condition mRNA_1150 mRNA_1151 mRNA_1152 mRNA_1153 mRNA_1154
9518 9519 9520 9521 9522
ypd buoyancy 40 hrs No Buoyancy Separation +0.4 -2.0 -0.4 -2.0 -0.6
growth on ypd YPD +0.1 -0.9 +0.0 -0.6 -0.2
ypd buoyancy 40 hrs High Buoyancy +0.3 -0.9 -0.2 +0.3 -0.1
auxotrophy YNB Glucose 75mM Arginine -0.1 -0.1 -0.1 -0.2 -0.2
ypd buoyancy 40 hrs Median Buoyancy +0.1 -0.4 -0.2 +0.2 -0.3
growth on oleic acid YNB Oleic Acid -0.2 -0.4 -0.1 +0.2 -0.1
auxotrophy YNB Glucose -0.3 -0.0 -0.1 -0.3 +0.3
growth on ricinoleic acid YNB Methylricinoleic Acid -0.3 -0.7 +0.6 +0.3 -0.4
growth on ricinoleic acid YNB Glucose -0.8 +0.2 +0.3 +0.3 -0.2
auxotrophy Dropout Complete -0.4 +0.4 +0.1 -0.2 +0.2
ypd buoyancy 40 hrs Low Buoyancy +0.4 +0.1 -0.2 -0.2 -0.0
auxotrophy YNB Glucose 75mM Methionine -0.2 +0.3 -0.1 -0.0 +0.3
buoyancy on lipid accumulation 40 hrs High Buoyancy -0.1 +0.3 -0.1 -0.3 +0.5
facs on lipid accumulation Sorted High BODIPY Gate +0.4 +0.1 -0.1 -0.7 +0.7
facs on lipid accumulation Sorted No BODIPY Gate -0.1 +0.3 -0.3 +0.2 +0.2
growth on oleic acid YNB Glucose -0.0 -0.3 -0.0 +0.5 +0.3
growth on ricinoleic acid YNB Ricinoleic Acid -0.6 +0.4 +0.5 +0.7 -0.4
buoyancy on lipid accumulation 40 hrs Median Buoyancy +0.0 +0.8 +0.3 -0.3 +0.2
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation -0.5 +1.1 +0.6 -0.5 +0.4
buoyancy on lipid accumulation 40 hrs Low Buoyancy -0.2 +0.4 +0.3 -0.0 +0.6
facs on lipid accumulation Sorted Low BODIPY Gate -0.1 +1.2 -0.2 +0.4 +0.2
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