Fitness for 5 genes in Rhodosporidium toruloides IFO0880

Add gene:

Number of genes on each side:  

Top 21 experiments (either direction), sorted by average fitness

Or view all 21 experiments or choose conditions or try the comparative fitness browser

500 nt 9525 and 9526 are separated by 514 nucleotides9526 and 9527 are separated by 675 nucleotides9527 and 9528 are separated by 32 nucleotides9528 and 9529 are separated by 444 nucleotides mRNA_1157: 9525 - K14818 SQT1 ribosome assembly protein SQT1, at 531,850 to 533,484 9525 mRNA_1158: 9526 - Hypothetical Protein, at 533,999 to 537,881 9526 mRNA_1159: 9527 - HMMPfam-Archaeal ATPase-PF01637,SUPERFAMILY--SSF52540, at 538,557 to 540,883 9527 mRNA_1160: 9528 - KOG4159 Predicted E3 ubiquitin ligase, at 540,916 to 543,538 9528 mRNA_1161: 9529 - K03028 PSMD2, RPN1 26S proteasome regulatory subunit N1, at 543,983 to 547,395 9529
Group Condition mRNA_1157 mRNA_1158 mRNA_1159 mRNA_1160 mRNA_1161
9525 9526 9527 9528 9529
facs on lipid accumulation Sorted High BODIPY Gate N.D. +0.5 -0.3 -1.0 N.D.
ypd buoyancy 40 hrs No Buoyancy Separation N.D. +0.3 +0.1 -1.2 N.D.
growth on ricinoleic acid YNB Ricinoleic Acid N.D. +0.0 -0.2 -0.5 N.D.
facs on lipid accumulation Sorted No BODIPY Gate N.D. -0.2 -0.1 -0.2 N.D.
auxotrophy YNB Glucose 75mM Arginine N.D. +0.1 -0.0 -0.4 N.D.
auxotrophy YNB Glucose 75mM Methionine N.D. +0.3 +0.2 -0.8 N.D.
growth on oleic acid YNB Glucose N.D. +0.0 +0.1 -0.4 N.D.
growth on ricinoleic acid YNB Methylricinoleic Acid N.D. +0.1 +0.0 -0.4 N.D.
ypd buoyancy 40 hrs Low Buoyancy N.D. +0.2 -0.1 -0.2 N.D.
ypd buoyancy 40 hrs High Buoyancy N.D. +0.2 -0.4 +0.0 N.D.
ypd buoyancy 40 hrs Median Buoyancy N.D. +0.0 -0.1 -0.0 N.D.
auxotrophy YNB Glucose N.D. +0.2 +0.2 -0.4 N.D.
auxotrophy Dropout Complete N.D. -0.0 +0.3 -0.2 N.D.
growth on ypd YPD N.D. +0.2 +0.0 -0.1 N.D.
growth on oleic acid YNB Oleic Acid N.D. +0.2 +0.0 -0.1 N.D.
growth on ricinoleic acid YNB Glucose N.D. +0.1 +0.2 -0.1 N.D.
buoyancy on lipid accumulation 40 hrs Median Buoyancy N.D. +0.0 +0.4 -0.1 N.D.
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation N.D. +0.2 +0.2 +0.3 N.D.
facs on lipid accumulation Sorted Low BODIPY Gate N.D. +0.5 +0.1 +0.1 N.D.
buoyancy on lipid accumulation 40 hrs Low Buoyancy N.D. +0.0 +0.4 +0.6 N.D.
buoyancy on lipid accumulation 40 hrs High Buoyancy N.D. +0.2 +0.2 +0.7 N.D.
remove
mRNA_1157
plot
remove
mRNA_1158
plot
remove
mRNA_1159
remove
mRNA_1160
plot
remove
mRNA_1161
plot