Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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500 nt 9526 and 9527 are separated by 675 nucleotides9527 and 9528 are separated by 32 nucleotides9528 and 9529 are separated by 444 nucleotides9529 and 9530 are separated by 403 nucleotides mRNA_1158: 9526 - Hypothetical Protein, at 533,999 to 537,881 9526 mRNA_1159: 9527 - HMMPfam-Archaeal ATPase-PF01637,SUPERFAMILY--SSF52540, at 538,557 to 540,883 9527 mRNA_1160: 9528 - KOG4159 Predicted E3 ubiquitin ligase, at 540,916 to 543,538 9528 mRNA_1161: 9529 - K03028 PSMD2, RPN1 26S proteasome regulatory subunit N1, at 543,983 to 547,395 9529 mRNA_1162: 9530 - SUPERFAMILY--SSF52047, at 547,799 to 548,923 9530
Group Condition mRNA_1158 mRNA_1159 mRNA_1160 mRNA_1161 mRNA_1162
9526 9527 9528 9529 9530
ypd buoyancy 40 hrs No Buoyancy Separation +0.3 +0.1 -1.2 N.D. -0.7
facs on lipid accumulation Sorted High BODIPY Gate +0.5 -0.3 -1.0 N.D. -0.3
growth on ricinoleic acid YNB Ricinoleic Acid +0.0 -0.2 -0.5 N.D. +0.0
facs on lipid accumulation Sorted No BODIPY Gate -0.2 -0.1 -0.2 N.D. +0.1
ypd buoyancy 40 hrs Low Buoyancy +0.2 -0.1 -0.2 N.D. -0.1
ypd buoyancy 40 hrs High Buoyancy +0.2 -0.4 +0.0 N.D. -0.0
growth on oleic acid YNB Glucose +0.0 +0.1 -0.4 N.D. +0.1
ypd buoyancy 40 hrs Median Buoyancy +0.0 -0.1 -0.0 N.D. -0.0
auxotrophy YNB Glucose 75mM Arginine +0.1 -0.0 -0.4 N.D. +0.2
growth on ricinoleic acid YNB Methylricinoleic Acid +0.1 +0.0 -0.4 N.D. +0.2
growth on ypd YPD +0.2 +0.0 -0.1 N.D. -0.1
auxotrophy YNB Glucose 75mM Methionine +0.3 +0.2 -0.8 N.D. +0.3
growth on oleic acid YNB Oleic Acid +0.2 +0.0 -0.1 N.D. -0.1
buoyancy on lipid accumulation 40 hrs Median Buoyancy +0.0 +0.4 -0.1 N.D. -0.1
auxotrophy Dropout Complete -0.0 +0.3 -0.2 N.D. +0.3
auxotrophy YNB Glucose +0.2 +0.2 -0.4 N.D. +0.3
growth on ricinoleic acid YNB Glucose +0.1 +0.2 -0.1 N.D. +0.3
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation +0.2 +0.2 +0.3 N.D. -0.1
buoyancy on lipid accumulation 40 hrs High Buoyancy +0.2 +0.2 +0.7 N.D. -0.4
buoyancy on lipid accumulation 40 hrs Low Buoyancy +0.0 +0.4 +0.6 N.D. +0.1
facs on lipid accumulation Sorted Low BODIPY Gate +0.5 +0.1 +0.1 N.D. +0.4
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