Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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500 nt 9528 and 9529 are separated by 444 nucleotides9529 and 9530 are separated by 403 nucleotides9530 and 9531 are separated by 442 nucleotides9531 and 9532 are separated by 836 nucleotides mRNA_1160: 9528 - KOG4159 Predicted E3 ubiquitin ligase, at 540,916 to 543,538 9528 mRNA_1161: 9529 - K03028 PSMD2, RPN1 26S proteasome regulatory subunit N1, at 543,983 to 547,395 9529 mRNA_1162: 9530 - SUPERFAMILY--SSF52047, at 547,799 to 548,923 9530 mRNA_1163: 9531 - KOG1378 Purple acid phosphatase, at 549,366 to 551,873 9531 mRNA_1164: 9532 - Hypothetical Protein, at 552,710 to 552,960 9532
Group Condition mRNA_1160 mRNA_1161 mRNA_1162 mRNA_1163 mRNA_1164
9528 9529 9530 9531 9532
ypd buoyancy 40 hrs No Buoyancy Separation -1.2 N.D. -0.7 -0.8 +0.2
facs on lipid accumulation Sorted High BODIPY Gate -1.0 N.D. -0.3 -0.2 +0.0
growth on ricinoleic acid YNB Ricinoleic Acid -0.5 N.D. +0.0 -0.2 -0.0
auxotrophy YNB Glucose 75mM Methionine -0.8 N.D. +0.3 +0.1 -0.1
growth on oleic acid YNB Glucose -0.4 N.D. +0.1 -0.0 +0.0
growth on oleic acid YNB Oleic Acid -0.1 N.D. -0.1 -0.1 +0.0
facs on lipid accumulation Sorted No BODIPY Gate -0.2 N.D. +0.1 -0.3 +0.3
growth on ypd YPD -0.1 N.D. -0.1 -0.0 +0.2
buoyancy on lipid accumulation 40 hrs Median Buoyancy -0.1 N.D. -0.1 -0.0 +0.2
growth on ricinoleic acid YNB Methylricinoleic Acid -0.4 N.D. +0.2 -0.2 +0.3
auxotrophy YNB Glucose -0.4 N.D. +0.3 +0.1 -0.0
ypd buoyancy 40 hrs Median Buoyancy -0.0 N.D. -0.0 -0.1 +0.2
ypd buoyancy 40 hrs Low Buoyancy -0.2 N.D. -0.1 +0.1 +0.3
auxotrophy YNB Glucose 75mM Arginine -0.4 N.D. +0.2 +0.2 +0.1
growth on ricinoleic acid YNB Glucose -0.1 N.D. +0.3 -0.1 +0.1
ypd buoyancy 40 hrs High Buoyancy +0.0 N.D. -0.0 +0.2 +0.4
auxotrophy Dropout Complete -0.2 N.D. +0.3 +0.3 +0.2
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation +0.3 N.D. -0.1 -0.0 +0.6
facs on lipid accumulation Sorted Low BODIPY Gate +0.1 N.D. +0.4 -0.2 +0.4
buoyancy on lipid accumulation 40 hrs High Buoyancy +0.7 N.D. -0.4 -0.0 +0.5
buoyancy on lipid accumulation 40 hrs Low Buoyancy +0.6 N.D. +0.1 +0.1 +0.5
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