Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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500 nt 9531 and 9532 are separated by 836 nucleotides9532 and 9533 are separated by 430 nucleotides9533 and 9534 are separated by 415 nucleotides9534 and 9535 are separated by 526 nucleotides mRNA_1163: 9531 - KOG1378 Purple acid phosphatase, at 549,366 to 551,873 9531 mRNA_1164: 9532 - Hypothetical Protein, at 552,710 to 552,960 9532 mRNA_1165: 9533 - HMMPfam-Protein of unknown function (DUF1445)-PF07286,PIRSF--PIRSF029755,SUPERFAMILY--SSF160920, at 553,391 to 554,372 9533 mRNA_1166: 9534 - KOG2533 Permease of the major facilitator superfamily, at 554,788 to 557,060 9534 mRNA_1167: 9535 - HMMPfam-Fungal Zn(2)-Cys(6) binuclear cluster domain-PF00172,HMMPfam-Fungal specific transcription factor domain-PF04082,ProSitePatterns-Zn(2)-C6 fungal-type DNA-binding domain signature.-PS00463,ProSiteProfiles-Zn(2)-C6 fungal-type DNA-binding domain profile.-PS50048,SMART-GAL4-like Zn(II)2Cys6 (or C6 zinc) binuclear cluster DNA-binding domain-SM00066,SMART-Fungal specific transcription factor domain-SM00906,SUPERFAMILY--SSF57701, at 557,587 to 560,660 9535
Group Condition mRNA_1163 mRNA_1164 mRNA_1165 mRNA_1166 mRNA_1167
9531 9532 9533 9534 9535
ypd buoyancy 40 hrs No Buoyancy Separation -0.8 +0.2 -1.4 -0.4 -0.4
growth on ricinoleic acid YNB Ricinoleic Acid -0.2 -0.0 -0.1 -0.1 -0.1
facs on lipid accumulation Sorted High BODIPY Gate -0.2 +0.0 +0.0 -0.0 -0.4
growth on ricinoleic acid YNB Glucose -0.1 +0.1 -0.1 -0.3 +0.0
growth on ricinoleic acid YNB Methylricinoleic Acid -0.2 +0.3 -0.0 -0.1 -0.3
facs on lipid accumulation Sorted Low BODIPY Gate -0.2 +0.4 +0.1 -0.0 -0.5
facs on lipid accumulation Sorted No BODIPY Gate -0.3 +0.3 +0.2 +0.0 -0.2
auxotrophy YNB Glucose 75mM Methionine +0.1 -0.1 +0.1 -0.2 +0.2
ypd buoyancy 40 hrs High Buoyancy +0.2 +0.4 -0.1 -0.3 -0.0
auxotrophy YNB Glucose +0.1 -0.0 +0.0 -0.2 +0.3
auxotrophy YNB Glucose 75mM Arginine +0.2 +0.1 +0.1 -0.4 +0.3
growth on oleic acid YNB Oleic Acid -0.1 +0.0 +0.5 -0.4 +0.2
buoyancy on lipid accumulation 40 hrs Median Buoyancy -0.0 +0.2 +0.3 +0.2 -0.1
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation -0.0 +0.6 -0.1 +0.1 -0.0
growth on ypd YPD -0.0 +0.2 +0.1 +0.1 +0.3
growth on oleic acid YNB Glucose -0.0 +0.0 +0.5 -0.1 +0.2
buoyancy on lipid accumulation 40 hrs High Buoyancy -0.0 +0.5 +0.2 +0.1 -0.1
ypd buoyancy 40 hrs Median Buoyancy -0.1 +0.2 +0.3 +0.0 +0.3
buoyancy on lipid accumulation 40 hrs Low Buoyancy +0.1 +0.5 +0.2 +0.2 -0.2
ypd buoyancy 40 hrs Low Buoyancy +0.1 +0.3 +0.2 +0.0 +0.4
auxotrophy Dropout Complete +0.3 +0.2 +0.4 -0.3 +0.5
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