Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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500 nt 9538 and 9539 are separated by 120 nucleotides9539 and 9540 are separated by 372 nucleotides9540 and 9541 are separated by 206 nucleotides9541 and 9542 are separated by 501 nucleotides mRNA_1170: 9538 - K09531 DNAJC11 DnaJ homolog subfamily C member 11, at 566,177 to 568,431 9538 mRNA_1171: 9539 - K07277 SAM50, TOB55, bamA outer membrane protein insertion porin family, at 568,552 to 570,961 9539 mRNA_1172: 9540 - KOG2277 S-M checkpoint control protein CID1 and related nucleotidyltransferases, at 571,334 to 573,898 9540 mRNA_1173: 9541 - Hypothetical Protein, at 574,105 to 575,221 9541 mRNA_1174: 9542 - K15190 MEPCE, BCDIN3 7SK snRNA methylphosphate capping enzyme, at 575,723 to 577,057 9542
Group Condition mRNA_1170 mRNA_1171 mRNA_1172 mRNA_1173 mRNA_1174
9538 9539 9540 9541 9542
growth on ricinoleic acid YNB Glucose -0.4 N.D. -0.3 +0.1 -0.2
growth on ricinoleic acid YNB Methylricinoleic Acid -0.3 N.D. -0.1 +0.2 -0.3
facs on lipid accumulation Sorted High BODIPY Gate -1.0 N.D. +0.1 +0.0 +0.4
facs on lipid accumulation Sorted Low BODIPY Gate -0.9 N.D. +0.1 +0.2 +0.2
buoyancy on lipid accumulation 40 hrs Median Buoyancy -0.6 N.D. +0.4 -0.0 -0.2
buoyancy on lipid accumulation 40 hrs Low Buoyancy -0.5 N.D. +0.2 +0.0 -0.0
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation -0.3 N.D. +0.4 -0.0 -0.4
ypd buoyancy 40 hrs Low Buoyancy -0.4 N.D. -0.0 +0.0 +0.1
ypd buoyancy 40 hrs No Buoyancy Separation +0.2 N.D. -0.5 +0.1 +0.1
growth on ricinoleic acid YNB Ricinoleic Acid -0.1 N.D. +0.1 +0.1 -0.1
buoyancy on lipid accumulation 40 hrs High Buoyancy -0.2 N.D. +0.1 +0.1 -0.1
facs on lipid accumulation Sorted No BODIPY Gate -0.2 N.D. +0.2 +0.0 -0.0
ypd buoyancy 40 hrs Median Buoyancy -0.2 N.D. +0.0 +0.1 +0.1
ypd buoyancy 40 hrs High Buoyancy -0.1 N.D. +0.1 +0.0 +0.1
auxotrophy YNB Glucose 75mM Methionine +0.1 N.D. +0.1 +0.0 +0.0
auxotrophy YNB Glucose 75mM Arginine +0.2 N.D. +0.0 +0.1 -0.0
auxotrophy Dropout Complete +0.5 N.D. +0.0 +0.0 -0.3
auxotrophy YNB Glucose +0.4 N.D. +0.0 -0.0 -0.0
growth on oleic acid YNB Oleic Acid +0.0 N.D. +0.2 +0.1 +0.3
growth on oleic acid YNB Glucose -0.2 N.D. +0.4 +0.1 +0.5
growth on ypd YPD +0.3 N.D. +0.3 +0.1 +0.1
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