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Protein
Homologs
Fitness for 5 genes in
Rhodosporidium toruloides IFO0880
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Top 21 experiments (either direction), sorted by average fitness
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500 nt
9540 and 9541 are separated by 206 nucleotides
9541 and 9542 are separated by 501 nucleotides
9542 and 9543 are separated by 484 nucleotides
9543 and 9544 are separated by 229 nucleotides
mRNA_1172: 9540 - KOG2277 S-M checkpoint control protein CID1 and related nucleotidyltransferases, at 571,334 to 573,898
9540
mRNA_1173: 9541 - Hypothetical Protein, at 574,105 to 575,221
9541
mRNA_1174: 9542 - K15190 MEPCE, BCDIN3 7SK snRNA methylphosphate capping enzyme, at 575,723 to 577,057
9542
mRNA_1175: 9543 - Hypothetical Protein, at 577,542 to 578,636
9543
mRNA_1176: 9544 - Hypothetical Protein, at 578,866 to 579,597
9544
Group
Condition
mRNA
_1172
mRNA
_1173
mRNA
_1174
mRNA
_1175
mRNA
_1176
9540
9541
9542
9543
9544
growth on ricinoleic acid
YNB Methylricinoleic Acid
-0.1
+0.2
-0.3
-0.1
-0.2
growth on ricinoleic acid
YNB Ricinoleic Acid
+0.1
+0.1
-0.1
-0.0
-0.5
growth on ricinoleic acid
YNB Glucose
-0.3
+0.1
-0.2
-0.0
+0.0
auxotrophy
YNB Glucose
+0.0
-0.0
-0.0
-0.1
+0.0
auxotrophy
Dropout Complete
+0.0
+0.0
-0.3
+0.1
-0.0
ypd buoyancy
40 hrs No Buoyancy Separation
-0.5
+0.1
+0.1
-0.3
+0.6
ypd buoyancy
40 hrs High Buoyancy
+0.1
+0.0
+0.1
-0.1
-0.1
buoyancy on lipid accumulation
40 hrs Low Buoyancy
+0.2
+0.0
-0.0
-0.2
-0.0
auxotrophy
YNB Glucose 75mM Arginine
+0.0
+0.1
-0.0
-0.2
+0.1
auxotrophy
YNB Glucose 75mM Methionine
+0.1
+0.0
+0.0
-0.1
+0.0
growth on oleic acid
YNB Oleic Acid
+0.2
+0.1
+0.3
-0.0
-0.4
facs on lipid accumulation
Sorted No BODIPY Gate
+0.2
+0.0
-0.0
+0.2
-0.2
ypd buoyancy
40 hrs Low Buoyancy
-0.0
+0.0
+0.1
+0.2
-0.2
facs on lipid accumulation
Sorted High BODIPY Gate
+0.1
+0.0
+0.4
+0.0
-0.3
growth on ypd
YPD
+0.3
+0.1
+0.1
-0.2
-0.1
buoyancy on lipid accumulation
40 hrs No Buoyancy Separation
+0.4
-0.0
-0.4
-0.4
+0.7
buoyancy on lipid accumulation
40 hrs Median Buoyancy
+0.4
-0.0
-0.2
+0.1
+0.1
ypd buoyancy
40 hrs Median Buoyancy
+0.0
+0.1
+0.1
+0.1
+0.1
buoyancy on lipid accumulation
40 hrs High Buoyancy
+0.1
+0.1
-0.1
-0.2
+0.5
facs on lipid accumulation
Sorted Low BODIPY Gate
+0.1
+0.2
+0.2
+0.2
+0.1
growth on oleic acid
YNB Glucose
+0.4
+0.1
+0.5
+0.3
-0.1
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