Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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500 nt 9543 and 9544 are separated by 229 nucleotides9544 and 9545 are separated by 590 nucleotides9545 and 9546 are separated by 161 nucleotides9546 and 9547 are separated by 265 nucleotides mRNA_1175: 9543 - Hypothetical Protein, at 577,542 to 578,636 9543 mRNA_1176: 9544 - Hypothetical Protein, at 578,866 to 579,597 9544 mRNA_1177: 9545 - K15326 TSEN54 tRNA-splicing endonuclease subunit Sen54, at 580,188 to 581,963 9545 mRNA_1178: 9546 - Hypothetical Protein, at 582,125 to 583,749 9546 mRNA_1179: 9547 - K12611 DCP1B mRNA-decapping enzyme 1B, at 584,015 to 586,277 9547
Group Condition mRNA_1175 mRNA_1176 mRNA_1177 mRNA_1178 mRNA_1179
9543 9544 9545 9546 9547
ypd buoyancy 40 hrs No Buoyancy Separation -0.3 +0.6 N.D. -0.3 -1.3
facs on lipid accumulation Sorted Low BODIPY Gate +0.2 +0.1 N.D. -0.1 -1.0
ypd buoyancy 40 hrs High Buoyancy -0.1 -0.1 N.D. -0.1 -0.2
growth on oleic acid YNB Oleic Acid -0.0 -0.4 N.D. -0.7 +0.7
ypd buoyancy 40 hrs Median Buoyancy +0.1 +0.1 N.D. +0.0 -0.5
facs on lipid accumulation Sorted No BODIPY Gate +0.2 -0.2 N.D. +0.2 -0.4
growth on ricinoleic acid YNB Methylricinoleic Acid -0.1 -0.2 N.D. +0.1 -0.1
ypd buoyancy 40 hrs Low Buoyancy +0.2 -0.2 N.D. +0.2 -0.5
buoyancy on lipid accumulation 40 hrs High Buoyancy -0.2 +0.5 N.D. -0.0 -0.4
facs on lipid accumulation Sorted High BODIPY Gate +0.0 -0.3 N.D. +0.4 -0.2
buoyancy on lipid accumulation 40 hrs Median Buoyancy +0.1 +0.1 N.D. +0.1 -0.2
growth on oleic acid YNB Glucose +0.3 -0.1 N.D. -0.3 +0.2
growth on ypd YPD -0.2 -0.1 N.D. +0.2 +0.4
growth on ricinoleic acid YNB Ricinoleic Acid -0.0 -0.5 N.D. +0.3 +0.6
growth on ricinoleic acid YNB Glucose -0.0 +0.0 N.D. +0.2 +0.2
buoyancy on lipid accumulation 40 hrs Low Buoyancy -0.2 -0.0 N.D. +0.3 +0.2
auxotrophy YNB Glucose 75mM Methionine -0.1 +0.0 N.D. +0.4 -0.0
auxotrophy YNB Glucose -0.1 +0.0 N.D. +0.8 -0.2
auxotrophy Dropout Complete +0.1 -0.0 N.D. +1.0 -0.4
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation -0.4 +0.7 N.D. +0.3 +0.3
auxotrophy YNB Glucose 75mM Arginine -0.2 +0.1 N.D. +1.0 +0.1
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