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Fitness for 5 genes in
Rhodosporidium toruloides IFO0880
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Top 21 experiments (either direction), sorted by average fitness
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500 nt
9545 and 9546 are separated by 161 nucleotides
9546 and 9547 are separated by 265 nucleotides
9547 and 9548 are separated by 780 nucleotides
9548 and 9549 are separated by 283 nucleotides
mRNA_1177: 9545 - K15326 TSEN54 tRNA-splicing endonuclease subunit Sen54, at 580,188 to 581,963
9545
mRNA_1178: 9546 - Hypothetical Protein, at 582,125 to 583,749
9546
mRNA_1179: 9547 - K12611 DCP1B mRNA-decapping enzyme 1B, at 584,015 to 586,277
9547
mRNA_1180: 9548 - Hypothetical Protein, at 587,058 to 592,378
9548
mRNA_1181: 9549 - Hypothetical Protein, at 592,662 to 593,327
9549
Group
Condition
mRNA
_1177
mRNA
_1178
mRNA
_1179
mRNA
_1180
mRNA
_1181
9545
9546
9547
9548
9549
facs on lipid accumulation
Sorted Low BODIPY Gate
N.D.
-0.1
-1.0
-0.2
-1.0
ypd buoyancy
40 hrs No Buoyancy Separation
N.D.
-0.3
-1.3
-0.1
-0.2
facs on lipid accumulation
Sorted High BODIPY Gate
N.D.
+0.4
-0.2
-0.1
-1.6
ypd buoyancy
40 hrs High Buoyancy
N.D.
-0.1
-0.2
+0.0
-0.9
growth on ricinoleic acid
YNB Glucose
N.D.
+0.2
+0.2
+0.0
-1.4
auxotrophy
Dropout Complete
N.D.
+1.0
-0.4
+0.0
-1.5
facs on lipid accumulation
Sorted No BODIPY Gate
N.D.
+0.2
-0.4
-0.2
-0.5
auxotrophy
YNB Glucose 75mM Methionine
N.D.
+0.4
-0.0
+0.1
-1.3
ypd buoyancy
40 hrs Low Buoyancy
N.D.
+0.2
-0.5
-0.1
-0.4
buoyancy on lipid accumulation
40 hrs High Buoyancy
N.D.
-0.0
-0.4
+0.1
-0.4
growth on oleic acid
YNB Glucose
N.D.
-0.3
+0.2
-0.2
-0.3
ypd buoyancy
40 hrs Median Buoyancy
N.D.
+0.0
-0.5
-0.0
-0.0
buoyancy on lipid accumulation
40 hrs Median Buoyancy
N.D.
+0.1
-0.2
+0.0
-0.5
growth on ricinoleic acid
YNB Methylricinoleic Acid
N.D.
+0.1
-0.1
+0.1
-0.6
auxotrophy
YNB Glucose
N.D.
+0.8
-0.2
+0.2
-1.2
growth on oleic acid
YNB Oleic Acid
N.D.
-0.7
+0.7
-0.0
-0.3
auxotrophy
YNB Glucose 75mM Arginine
N.D.
+1.0
+0.1
+0.1
-0.9
growth on ypd
YPD
N.D.
+0.2
+0.4
-0.1
-0.0
buoyancy on lipid accumulation
40 hrs No Buoyancy Separation
N.D.
+0.3
+0.3
+0.3
-0.3
buoyancy on lipid accumulation
40 hrs Low Buoyancy
N.D.
+0.3
+0.2
-0.0
+0.3
growth on ricinoleic acid
YNB Ricinoleic Acid
N.D.
+0.3
+0.6
-0.0
+0.0
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