Fitness for 5 genes in Rhodosporidium toruloides IFO0880

Add gene:

Number of genes on each side:  

Top 21 experiments (either direction), sorted by average fitness

Or view all 21 experiments or choose conditions or try the comparative fitness browser

500 nt 9548 and 9549 are separated by 283 nucleotides9549 and 9550 are separated by 412 nucleotides9550 and 9551 are separated by 267 nucleotides9551 and 9552 are separated by 558 nucleotides mRNA_1180: 9548 - Hypothetical Protein, at 587,058 to 592,378 9548 mRNA_1181: 9549 - Hypothetical Protein, at 592,662 to 593,327 9549 mRNA_1182: 9550 - K12816 CDC40, PRP17 pre-mRNA-processing factor 17, at 593,740 to 596,442 9550 mRNA_1183: 9551 - KOG2533 Permease of the major facilitator superfamily, at 596,710 to 598,781 9551 mRNA_1184: 9552 - KOG0143 Iron/ascorbate family oxidoreductases, at 599,340 to 600,971 9552
Group Condition mRNA_1180 mRNA_1181 mRNA_1182 mRNA_1183 mRNA_1184
9548 9549 9550 9551 9552
facs on lipid accumulation Sorted High BODIPY Gate -0.1 -1.6 N.D. -0.1 -0.1
facs on lipid accumulation Sorted Low BODIPY Gate -0.2 -1.0 N.D. -0.2 -0.2
auxotrophy Dropout Complete +0.0 -1.5 N.D. +0.0 +0.1
auxotrophy YNB Glucose 75mM Methionine +0.1 -1.3 N.D. +0.0 -0.1
growth on ricinoleic acid YNB Glucose +0.0 -1.4 N.D. +0.1 +0.2
facs on lipid accumulation Sorted No BODIPY Gate -0.2 -0.5 N.D. -0.4 +0.0
auxotrophy YNB Glucose +0.2 -1.2 N.D. +0.1 -0.1
ypd buoyancy 40 hrs High Buoyancy +0.0 -0.9 N.D. +0.0 +0.1
auxotrophy YNB Glucose 75mM Arginine +0.1 -0.9 N.D. +0.0 -0.0
ypd buoyancy 40 hrs No Buoyancy Separation -0.1 -0.2 N.D. -0.3 +0.1
growth on oleic acid YNB Glucose -0.2 -0.3 N.D. +0.0 -0.0
buoyancy on lipid accumulation 40 hrs Median Buoyancy +0.0 -0.5 N.D. -0.0 -0.0
growth on ricinoleic acid YNB Methylricinoleic Acid +0.1 -0.6 N.D. -0.2 +0.2
ypd buoyancy 40 hrs Low Buoyancy -0.1 -0.4 N.D. +0.1 -0.0
buoyancy on lipid accumulation 40 hrs High Buoyancy +0.1 -0.4 N.D. +0.1 -0.2
growth on oleic acid YNB Oleic Acid -0.0 -0.3 N.D. -0.1 +0.0
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation +0.3 -0.3 N.D. -0.2 +0.0
buoyancy on lipid accumulation 40 hrs Low Buoyancy -0.0 +0.3 N.D. -0.3 -0.1
ypd buoyancy 40 hrs Median Buoyancy -0.0 -0.0 N.D. +0.0 +0.2
growth on ricinoleic acid YNB Ricinoleic Acid -0.0 +0.0 N.D. +0.3 -0.1
growth on ypd YPD -0.1 -0.0 N.D. +0.3 +0.1
remove
mRNA_1180
plot
remove
mRNA_1181
plot
remove
mRNA_1182
remove
mRNA_1183
plot
remove
mRNA_1184
plot