Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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500 nt 9555 and 9556 are separated by 271 nucleotides9556 and 9557 are separated by 573 nucleotides9557 and 9558 are separated by 612 nucleotides9558 and 9559 are separated by 400 nucleotides mRNA_1187: 9555 - Hypothetical Protein, at 607,459 to 608,635 9555 mRNA_1188: 9556 - Hypothetical Protein, at 608,907 to 610,370 9556 mRNA_1189: 9557 - K02183 CALM calmodulin, at 610,944 to 612,445 9557 mRNA_1190: 9558 - K05747 WAS Wiskott-Aldrich syndrome protein, at 613,058 to 614,661 9558 mRNA_1191: 9559 - KOG3033 Predicted PhzC/PhzF-type epimerase, at 615,062 to 616,261 9559
Group Condition mRNA_1187 mRNA_1188 mRNA_1189 mRNA_1190 mRNA_1191
9555 9556 9557 9558 9559
ypd buoyancy 40 hrs No Buoyancy Separation -0.7 -1.3 N.D. N.D. -0.7
facs on lipid accumulation Sorted Low BODIPY Gate -0.6 -1.4 N.D. N.D. +0.3
ypd buoyancy 40 hrs Low Buoyancy -0.0 -0.9 N.D. N.D. +0.1
ypd buoyancy 40 hrs Median Buoyancy +0.0 -0.9 N.D. N.D. +0.1
facs on lipid accumulation Sorted High BODIPY Gate -0.9 +0.3 N.D. N.D. -0.1
buoyancy on lipid accumulation 40 hrs High Buoyancy -0.2 -0.2 N.D. N.D. -0.1
ypd buoyancy 40 hrs High Buoyancy +0.1 -0.2 N.D. N.D. -0.3
growth on oleic acid YNB Glucose +0.1 -0.2 N.D. N.D. +0.1
growth on oleic acid YNB Oleic Acid +0.0 -0.2 N.D. N.D. +0.3
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation +0.3 -0.5 N.D. N.D. +0.3
facs on lipid accumulation Sorted No BODIPY Gate -0.2 +0.0 N.D. N.D. +0.4
growth on ricinoleic acid YNB Glucose -0.1 +0.3 N.D. N.D. +0.1
buoyancy on lipid accumulation 40 hrs Median Buoyancy +0.1 -0.0 N.D. N.D. +0.4
auxotrophy Dropout Complete +0.1 +0.5 N.D. N.D. +0.1
buoyancy on lipid accumulation 40 hrs Low Buoyancy +0.2 +0.5 N.D. N.D. +0.1
growth on ricinoleic acid YNB Ricinoleic Acid +0.1 +0.6 N.D. N.D. +0.2
auxotrophy YNB Glucose 75mM Methionine -0.1 +0.9 N.D. N.D. +0.1
auxotrophy YNB Glucose 75mM Arginine +0.3 +0.6 N.D. N.D. +0.1
growth on ricinoleic acid YNB Methylricinoleic Acid +0.0 +1.0 N.D. N.D. +0.1
growth on ypd YPD -0.1 +1.0 N.D. N.D. +0.3
auxotrophy YNB Glucose +0.3 +1.3 N.D. N.D. +0.3
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