Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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500 nt 9556 and 9557 are separated by 573 nucleotides9557 and 9558 are separated by 612 nucleotides9558 and 9559 are separated by 400 nucleotides9559 and 9560 are separated by 130 nucleotides mRNA_1188: 9556 - Hypothetical Protein, at 608,907 to 610,370 9556 mRNA_1189: 9557 - K02183 CALM calmodulin, at 610,944 to 612,445 9557 mRNA_1190: 9558 - K05747 WAS Wiskott-Aldrich syndrome protein, at 613,058 to 614,661 9558 mRNA_1191: 9559 - KOG3033 Predicted PhzC/PhzF-type epimerase, at 615,062 to 616,261 9559 mRNA_1192: 9560 - KOG2504 Monocarboxylate transporter, at 616,392 to 618,414 9560
Group Condition mRNA_1188 mRNA_1189 mRNA_1190 mRNA_1191 mRNA_1192
9556 9557 9558 9559 9560
ypd buoyancy 40 hrs No Buoyancy Separation -1.3 N.D. N.D. -0.7 -0.3
facs on lipid accumulation Sorted Low BODIPY Gate -1.4 N.D. N.D. +0.3 +0.1
ypd buoyancy 40 hrs Median Buoyancy -0.9 N.D. N.D. +0.1 -0.0
ypd buoyancy 40 hrs Low Buoyancy -0.9 N.D. N.D. +0.1 +0.0
ypd buoyancy 40 hrs High Buoyancy -0.2 N.D. N.D. -0.3 -0.2
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation -0.5 N.D. N.D. +0.3 -0.2
buoyancy on lipid accumulation 40 hrs High Buoyancy -0.2 N.D. N.D. -0.1 -0.1
growth on oleic acid YNB Oleic Acid -0.2 N.D. N.D. +0.3 -0.2
growth on oleic acid YNB Glucose -0.2 N.D. N.D. +0.1 -0.1
buoyancy on lipid accumulation 40 hrs Median Buoyancy -0.0 N.D. N.D. +0.4 -0.2
facs on lipid accumulation Sorted High BODIPY Gate +0.3 N.D. N.D. -0.1 +0.1
growth on ricinoleic acid YNB Glucose +0.3 N.D. N.D. +0.1 +0.0
buoyancy on lipid accumulation 40 hrs Low Buoyancy +0.5 N.D. N.D. +0.1 -0.2
facs on lipid accumulation Sorted No BODIPY Gate +0.0 N.D. N.D. +0.4 -0.0
auxotrophy Dropout Complete +0.5 N.D. N.D. +0.1 -0.1
auxotrophy YNB Glucose 75mM Arginine +0.6 N.D. N.D. +0.1 +0.1
auxotrophy YNB Glucose 75mM Methionine +0.9 N.D. N.D. +0.1 -0.1
growth on ricinoleic acid YNB Ricinoleic Acid +0.6 N.D. N.D. +0.2 +0.2
growth on ricinoleic acid YNB Methylricinoleic Acid +1.0 N.D. N.D. +0.1 +0.1
auxotrophy YNB Glucose +1.3 N.D. N.D. +0.3 -0.0
growth on ypd YPD +1.0 N.D. N.D. +0.3 +0.3
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