Fitness Browser
Home
Find Gene
BLAST
Experiments
Organisms
Help
Gene
Fitness
Nearby
Cofit
Protein
Homologs
Fitness for 5 genes in
Rhodosporidium toruloides IFO0880
Add gene:
Go
Number of genes on each side:
1
2
3
4
5
Go
Top 21 experiments (either direction), sorted by average fitness
Or view
all 21 experiments
or
choose conditions
or try the
comparative fitness browser
500 nt
9560 and 9561 are separated by 314 nucleotides
9561 and 9562 are separated by 441 nucleotides
9562 and 9563 are separated by 469 nucleotides
9563 and 9564 are separated by 792 nucleotides
mRNA_1192: 9560 - KOG2504 Monocarboxylate transporter, at 616,392 to 618,414
9560
mRNA_1193: 9561 - KOG2504 Monocarboxylate transporter, at 618,729 to 620,711
9561
mRNA_1194: 9562 - K05925 METTL3_14 mRNA (2'-O-methyladenosine-N6-)-methyltransferase, at 621,153 to 623,607
9562
mRNA_1195: 9563 - K03248 EIF3G translation initiation factor 3 subunit G, at 624,077 to 625,434
9563
mRNA_1196: 9564 - HMMPfam-Membrane bound O-acyl transferase family-PF13813, at 626,227 to 627,477
9564
Group
Condition
mRNA
_1192
mRNA
_1193
mRNA
_1194
mRNA
_1195
mRNA
_1196
9560
9561
9562
9563
9564
ypd buoyancy
40 hrs No Buoyancy Separation
-0.3
-0.5
-0.1
N.D.
-0.3
facs on lipid accumulation
Sorted High BODIPY Gate
+0.1
-0.3
-0.1
N.D.
-0.8
buoyancy on lipid accumulation
40 hrs No Buoyancy Separation
-0.2
-0.0
-0.1
N.D.
-0.7
growth on oleic acid
YNB Oleic Acid
-0.2
-0.1
+0.2
N.D.
-0.8
facs on lipid accumulation
Sorted No BODIPY Gate
-0.0
-0.1
-0.0
N.D.
-0.6
ypd buoyancy
40 hrs High Buoyancy
-0.2
+0.4
-0.2
N.D.
-0.7
auxotrophy
YNB Glucose
-0.0
+0.0
+0.4
N.D.
-0.9
auxotrophy
YNB Glucose 75mM Methionine
-0.1
-0.2
+0.1
N.D.
-0.2
ypd buoyancy
40 hrs Median Buoyancy
-0.0
+0.1
+0.2
N.D.
-0.5
buoyancy on lipid accumulation
40 hrs Median Buoyancy
-0.2
-0.2
-0.3
N.D.
+0.4
growth on oleic acid
YNB Glucose
-0.1
-0.2
+0.4
N.D.
-0.2
auxotrophy
YNB Glucose 75mM Arginine
+0.1
-0.0
+0.3
N.D.
-0.5
ypd buoyancy
40 hrs Low Buoyancy
+0.0
+0.0
+0.1
N.D.
-0.1
growth on ricinoleic acid
YNB Glucose
+0.0
-0.1
+0.5
N.D.
-0.4
buoyancy on lipid accumulation
40 hrs Low Buoyancy
-0.2
-0.4
+0.5
N.D.
+0.1
auxotrophy
Dropout Complete
-0.1
+0.0
+0.4
N.D.
-0.2
buoyancy on lipid accumulation
40 hrs High Buoyancy
-0.1
+0.3
-0.3
N.D.
+0.5
growth on ricinoleic acid
YNB Methylricinoleic Acid
+0.1
+0.3
+0.8
N.D.
-0.9
growth on ypd
YPD
+0.3
+0.2
-0.2
N.D.
+0.3
facs on lipid accumulation
Sorted Low BODIPY Gate
+0.1
-0.0
+0.6
N.D.
+0.1
growth on ricinoleic acid
YNB Ricinoleic Acid
+0.2
+0.3
+0.6
N.D.
-0.3
remove
mRNA_1192
plot
remove
mRNA_1193
plot
remove
mRNA_1194
remove
mRNA_1195
plot
remove
mRNA_1196
plot