Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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500 nt 9565 and 9566 are separated by 228 nucleotides9566 and 9567 are separated by 409 nucleotides9567 and 9568 are separated by 212 nucleotides9568 and 9569 are separated by 201 nucleotides mRNA_1197: 9565 - KOG2385 Uncharacterized conserved protein, at 628,765 to 631,426 9565 mRNA_1198: 9566 - Hypothetical Protein, at 631,655 to 633,710 9566 mRNA_1199: 9567 - K02325 POLE2 DNA polymerase epsilon subunit 2, at 634,120 to 636,519 9567 mRNA_1200: 9568 - KOG3132 m3G-cap-specific nuclear import receptor (Snurportin1), at 636,732 to 638,216 9568 mRNA_1201: 9569 - K12625 LSM6 U6 snRNA-associated Sm-like protein LSm6, at 638,418 to 638,898 9569
Group Condition mRNA_1197 mRNA_1198 mRNA_1199 mRNA_1200 mRNA_1201
9565 9566 9567 9568 9569
ypd buoyancy 40 hrs No Buoyancy Separation -0.2 +0.5 N.D. -1.1 N.D.
ypd buoyancy 40 hrs Median Buoyancy -0.3 +0.3 N.D. -0.6 N.D.
ypd buoyancy 40 hrs High Buoyancy -0.6 +0.5 N.D. -0.3 N.D.
auxotrophy YNB Glucose 75mM Arginine -0.7 +0.4 N.D. -0.1 N.D.
growth on oleic acid YNB Oleic Acid -0.2 -0.1 N.D. -0.0 N.D.
facs on lipid accumulation Sorted Low BODIPY Gate +0.7 -0.6 N.D. -0.3 N.D.
growth on ypd YPD +0.3 -0.6 N.D. -0.0 N.D.
ypd buoyancy 40 hrs Low Buoyancy -0.1 +0.0 N.D. -0.0 N.D.
buoyancy on lipid accumulation 40 hrs High Buoyancy +0.2 -0.1 N.D. -0.1 N.D.
growth on oleic acid YNB Glucose -0.1 -0.1 N.D. +0.2 N.D.
auxotrophy YNB Glucose -0.6 +0.5 N.D. +0.1 N.D.
auxotrophy Dropout Complete -0.4 +0.5 N.D. +0.2 N.D.
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation +0.2 -0.2 N.D. +0.2 N.D.
buoyancy on lipid accumulation 40 hrs Low Buoyancy +0.2 +0.2 N.D. -0.0 N.D.
auxotrophy YNB Glucose 75mM Methionine -0.1 +0.4 N.D. +0.1 N.D.
facs on lipid accumulation Sorted High BODIPY Gate +0.1 +0.4 N.D. -0.0 N.D.
buoyancy on lipid accumulation 40 hrs Median Buoyancy +0.2 +0.3 N.D. +0.0 N.D.
facs on lipid accumulation Sorted No BODIPY Gate +0.0 +0.2 N.D. +0.3 N.D.
growth on ricinoleic acid YNB Glucose -0.4 +0.1 N.D. +0.8 N.D.
growth on ricinoleic acid YNB Methylricinoleic Acid +0.2 -0.1 N.D. +0.7 N.D.
growth on ricinoleic acid YNB Ricinoleic Acid +0.5 +0.2 N.D. +0.1 N.D.
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