Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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500 nt 9566 and 9567 are separated by 409 nucleotides9567 and 9568 are separated by 212 nucleotides9568 and 9569 are separated by 201 nucleotides9569 and 9570 are separated by 1255 nucleotides mRNA_1198: 9566 - Hypothetical Protein, at 631,655 to 633,710 9566 mRNA_1199: 9567 - K02325 POLE2 DNA polymerase epsilon subunit 2, at 634,120 to 636,519 9567 mRNA_1200: 9568 - KOG3132 m3G-cap-specific nuclear import receptor (Snurportin1), at 636,732 to 638,216 9568 mRNA_1201: 9569 - K12625 LSM6 U6 snRNA-associated Sm-like protein LSm6, at 638,418 to 638,898 9569 mRNA_1202: 9570 - K11253 H3 histone H3, at 640,154 to 640,968 9570
Group Condition mRNA_1198 mRNA_1199 mRNA_1200 mRNA_1201 mRNA_1202
9566 9567 9568 9569 9570
ypd buoyancy 40 hrs No Buoyancy Separation +0.5 N.D. -1.1 N.D. -1.8
ypd buoyancy 40 hrs High Buoyancy +0.5 N.D. -0.3 N.D. -1.5
growth on ypd YPD -0.6 N.D. -0.0 N.D. -0.1
ypd buoyancy 40 hrs Low Buoyancy +0.0 N.D. -0.0 N.D. -0.7
ypd buoyancy 40 hrs Median Buoyancy +0.3 N.D. -0.6 N.D. -0.4
facs on lipid accumulation Sorted Low BODIPY Gate -0.6 N.D. -0.3 N.D. +0.3
growth on ricinoleic acid YNB Ricinoleic Acid +0.2 N.D. +0.1 N.D. -0.9
growth on oleic acid YNB Oleic Acid -0.1 N.D. -0.0 N.D. +0.1
growth on ricinoleic acid YNB Methylricinoleic Acid -0.1 N.D. +0.7 N.D. -0.5
growth on oleic acid YNB Glucose -0.1 N.D. +0.2 N.D. +0.2
auxotrophy Dropout Complete +0.5 N.D. +0.2 N.D. -0.2
buoyancy on lipid accumulation 40 hrs High Buoyancy -0.1 N.D. -0.1 N.D. +0.7
facs on lipid accumulation Sorted High BODIPY Gate +0.4 N.D. -0.0 N.D. +0.2
facs on lipid accumulation Sorted No BODIPY Gate +0.2 N.D. +0.3 N.D. +0.1
growth on ricinoleic acid YNB Glucose +0.1 N.D. +0.8 N.D. -0.2
auxotrophy YNB Glucose 75mM Methionine +0.4 N.D. +0.1 N.D. +0.2
auxotrophy YNB Glucose 75mM Arginine +0.4 N.D. -0.1 N.D. +0.5
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation -0.2 N.D. +0.2 N.D. +0.8
auxotrophy YNB Glucose +0.5 N.D. +0.1 N.D. +0.5
buoyancy on lipid accumulation 40 hrs Median Buoyancy +0.3 N.D. +0.0 N.D. +0.8
buoyancy on lipid accumulation 40 hrs Low Buoyancy +0.2 N.D. -0.0 N.D. +1.2
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