Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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500 nt 9569 and 9570 are separated by 1255 nucleotides9570 and 9571 are separated by 688 nucleotides9571 and 9572 are separated by 569 nucleotides9572 and 9573 are separated by 521 nucleotides mRNA_1201: 9569 - K12625 LSM6 U6 snRNA-associated Sm-like protein LSm6, at 638,418 to 638,898 9569 mRNA_1202: 9570 - K11253 H3 histone H3, at 640,154 to 640,968 9570 mRNA_1203: 9571 - K01049 ACHE acetylcholinesterase, at 641,657 to 643,946 9571 mRNA_1204: 9572 - K11253 H3 histone H3, at 644,516 to 645,336 9572 mRNA_1205: 9573 - Hypothetical Protein, at 645,858 to 646,499 9573
Group Condition mRNA_1201 mRNA_1202 mRNA_1203 mRNA_1204 mRNA_1205
9569 9570 9571 9572 9573
ypd buoyancy 40 hrs No Buoyancy Separation N.D. -1.8 -0.5 +0.3 -0.9
ypd buoyancy 40 hrs High Buoyancy N.D. -1.5 +0.0 +0.1 -0.6
facs on lipid accumulation Sorted Low BODIPY Gate N.D. +0.3 +0.0 -1.4 -0.4
auxotrophy Dropout Complete N.D. -0.2 -0.3 -0.8 +0.1
facs on lipid accumulation Sorted High BODIPY Gate N.D. +0.2 -0.0 -0.7 -0.7
facs on lipid accumulation Sorted No BODIPY Gate N.D. +0.1 +0.1 -0.8 -0.5
ypd buoyancy 40 hrs Low Buoyancy N.D. -0.7 -0.1 +0.0 -0.0
growth on ypd YPD N.D. -0.1 -0.2 -0.3 +0.0
ypd buoyancy 40 hrs Median Buoyancy N.D. -0.4 -0.2 -0.1 +0.0
growth on ricinoleic acid YNB Methylricinoleic Acid N.D. -0.5 +0.2 -0.5 +0.3
growth on ricinoleic acid YNB Ricinoleic Acid N.D. -0.9 +0.1 +0.1 +0.4
growth on oleic acid YNB Glucose N.D. +0.2 -0.1 -0.2 -0.1
auxotrophy YNB Glucose 75mM Methionine N.D. +0.2 -0.3 -0.2 +0.2
growth on oleic acid YNB Oleic Acid N.D. +0.1 +0.3 -0.1 -0.1
auxotrophy YNB Glucose 75mM Arginine N.D. +0.5 -0.1 -0.1 +0.2
growth on ricinoleic acid YNB Glucose N.D. -0.2 +0.2 +0.3 +0.3
auxotrophy YNB Glucose N.D. +0.5 -0.1 +0.1 +0.1
buoyancy on lipid accumulation 40 hrs Median Buoyancy N.D. +0.8 -0.2 +0.2 +0.9
buoyancy on lipid accumulation 40 hrs Low Buoyancy N.D. +1.2 -0.2 -0.2 +0.9
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation N.D. +0.8 -0.1 +0.3 +0.7
buoyancy on lipid accumulation 40 hrs High Buoyancy N.D. +0.7 -0.1 +0.5 +1.1
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