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Protein
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Fitness for 5 genes in
Rhodosporidium toruloides IFO0880
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Top 21 experiments (either direction), sorted by average fitness
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500 nt
9572 and 9573 are separated by 521 nucleotides
9573 and 9574 are separated by 245 nucleotides
9574 and 9575 are separated by 673 nucleotides
9575 and 9576 are separated by 993 nucleotides
mRNA_1204: 9572 - K11253 H3 histone H3, at 644,516 to 645,336
9572
mRNA_1205: 9573 - Hypothetical Protein, at 645,858 to 646,499
9573
mRNA_1206: 9574 - K00021 HMGCR hydroxymethylglutaryl-CoA reductase (NADPH), at 646,745 to 651,192
9574
mRNA_1207: 9575 - BLAST glycosyltransferase [Tsuchiyaea wingfieldii CBS 7..., at 651,866 to 653,313
9575
mRNA_1208: 9576 - Hypothetical Protein, at 654,307 to 655,456
9576
Group
Condition
mRNA
_1204
mRNA
_1205
mRNA
_1206
mRNA
_1207
mRNA
_1208
9572
9573
9574
9575
9576
facs on lipid accumulation
Sorted High BODIPY Gate
-0.7
-0.7
N.D.
-0.3
-2.2
facs on lipid accumulation
Sorted Low BODIPY Gate
-1.4
-0.4
N.D.
-0.8
-0.2
facs on lipid accumulation
Sorted No BODIPY Gate
-0.8
-0.5
N.D.
+0.1
-0.1
growth on oleic acid
YNB Glucose
-0.2
-0.1
N.D.
-0.0
-0.5
growth on ricinoleic acid
YNB Methylricinoleic Acid
-0.5
+0.3
N.D.
-0.3
-0.2
ypd buoyancy
40 hrs No Buoyancy Separation
+0.3
-0.9
N.D.
+0.1
+0.1
auxotrophy
Dropout Complete
-0.8
+0.1
N.D.
+0.1
+0.2
ypd buoyancy
40 hrs Median Buoyancy
-0.1
+0.0
N.D.
-0.1
-0.2
growth on oleic acid
YNB Oleic Acid
-0.1
-0.1
N.D.
-0.1
+0.1
auxotrophy
YNB Glucose 75mM Arginine
-0.1
+0.2
N.D.
-0.1
-0.1
ypd buoyancy
40 hrs High Buoyancy
+0.1
-0.6
N.D.
+0.2
+0.2
auxotrophy
YNB Glucose 75mM Methionine
-0.2
+0.2
N.D.
-0.1
+0.2
growth on ricinoleic acid
YNB Glucose
+0.3
+0.3
N.D.
-0.3
-0.2
growth on ypd
YPD
-0.3
+0.0
N.D.
+0.1
+0.3
buoyancy on lipid accumulation
40 hrs Low Buoyancy
-0.2
+0.9
N.D.
-0.0
-0.5
ypd buoyancy
40 hrs Low Buoyancy
+0.0
-0.0
N.D.
+0.1
+0.2
growth on ricinoleic acid
YNB Ricinoleic Acid
+0.1
+0.4
N.D.
-0.5
+0.3
auxotrophy
YNB Glucose
+0.1
+0.1
N.D.
-0.2
+0.5
buoyancy on lipid accumulation
40 hrs Median Buoyancy
+0.2
+0.9
N.D.
+0.3
-0.4
buoyancy on lipid accumulation
40 hrs No Buoyancy Separation
+0.3
+0.7
N.D.
-0.4
+0.4
buoyancy on lipid accumulation
40 hrs High Buoyancy
+0.5
+1.1
N.D.
+0.4
-0.5
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