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Fitness for 5 genes in
Rhodosporidium toruloides IFO0880
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Top 21 experiments (either direction), sorted by average fitness
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500 nt
9575 and 9576 are separated by 993 nucleotides
9576 and 9577 are separated by 781 nucleotides
9577 and 9578 are separated by 246 nucleotides
9578 and 9579 are separated by 160 nucleotides
mRNA_1207: 9575 - BLAST glycosyltransferase [Tsuchiyaea wingfieldii CBS 7..., at 651,866 to 653,313
9575
mRNA_1208: 9576 - Hypothetical Protein, at 654,307 to 655,456
9576
mRNA_1209: 9577 - Hypothetical Protein, at 656,238 to 657,706
9577
mRNA_1210: 9578 - K13076 SLD Delta8-fatty-acid desaturase, at 657,953 to 659,955
9578
mRNA_1211: 9579 - K15078 SLX1 structure-specific endonuclease subunit SLX1, at 660,116 to 662,467
9579
Group
Condition
mRNA
_1207
mRNA
_1208
mRNA
_1209
mRNA
_1210
mRNA
_1211
9575
9576
9577
9578
9579
facs on lipid accumulation
Sorted High BODIPY Gate
-0.3
-2.2
N.D.
N.D.
+0.4
facs on lipid accumulation
Sorted Low BODIPY Gate
-0.8
-0.2
N.D.
N.D.
+0.2
growth on ricinoleic acid
YNB Methylricinoleic Acid
-0.3
-0.2
N.D.
N.D.
-0.0
growth on oleic acid
YNB Glucose
-0.0
-0.5
N.D.
N.D.
+0.1
growth on ricinoleic acid
YNB Glucose
-0.3
-0.2
N.D.
N.D.
+0.1
growth on oleic acid
YNB Oleic Acid
-0.1
+0.1
N.D.
N.D.
-0.2
buoyancy on lipid accumulation
40 hrs High Buoyancy
+0.4
-0.5
N.D.
N.D.
-0.1
buoyancy on lipid accumulation
40 hrs Low Buoyancy
-0.0
-0.5
N.D.
N.D.
+0.4
buoyancy on lipid accumulation
40 hrs Median Buoyancy
+0.3
-0.4
N.D.
N.D.
+0.1
ypd buoyancy
40 hrs Median Buoyancy
-0.1
-0.2
N.D.
N.D.
+0.3
facs on lipid accumulation
Sorted No BODIPY Gate
+0.1
-0.1
N.D.
N.D.
+0.2
growth on ricinoleic acid
YNB Ricinoleic Acid
-0.5
+0.3
N.D.
N.D.
+0.4
growth on ypd
YPD
+0.1
+0.3
N.D.
N.D.
-0.1
ypd buoyancy
40 hrs No Buoyancy Separation
+0.1
+0.1
N.D.
N.D.
+0.2
auxotrophy
YNB Glucose 75mM Arginine
-0.1
-0.1
N.D.
N.D.
+0.9
auxotrophy
YNB Glucose 75mM Methionine
-0.1
+0.2
N.D.
N.D.
+0.6
buoyancy on lipid accumulation
40 hrs No Buoyancy Separation
-0.4
+0.4
N.D.
N.D.
+0.6
ypd buoyancy
40 hrs Low Buoyancy
+0.1
+0.2
N.D.
N.D.
+0.5
ypd buoyancy
40 hrs High Buoyancy
+0.2
+0.2
N.D.
N.D.
+0.3
auxotrophy
YNB Glucose
-0.2
+0.5
N.D.
N.D.
+0.9
auxotrophy
Dropout Complete
+0.1
+0.2
N.D.
N.D.
+1.2
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