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Fitness for 5 genes in
Rhodosporidium toruloides IFO0880
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Top 21 experiments (either direction), sorted by average fitness
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500 nt
9584 and 9585 are separated by 508 nucleotides
9585 and 9586 are separated by 503 nucleotides
9586 and 9587 are separated by 189 nucleotides
9587 and 9588 are separated by 589 nucleotides
mRNA_1216: 9584 - BLAST secreted protein [Melampsora larici-populina 98AG31], at 669,963 to 671,497
9584
mRNA_1217: 9585 - K10580 UBE2N, BLU, UBC13 ubiquitin-conjugating enzyme E2 N, at 672,006 to 672,875
9585
mRNA_1218: 9586 - SUPERFAMILY--SSF52047, at 673,379 to 675,043
9586
mRNA_1219: 9587 - KOG3202 SNARE protein TLG1/Syntaxin 6, at 675,233 to 676,117
9587
mRNA_1220: 9588 - KOG0254 Predicted transporter (major facilitator superfamily), at 676,707 to 679,515
9588
Group
Condition
mRNA
_1216
mRNA
_1217
mRNA
_1218
mRNA
_1219
mRNA
_1220
9584
9585
9586
9587
9588
facs on lipid accumulation
Sorted Low BODIPY Gate
-0.4
-2.8
-1.4
N.D.
-0.3
facs on lipid accumulation
Sorted High BODIPY Gate
-0.2
-2.0
+0.0
N.D.
-0.1
ypd buoyancy
40 hrs No Buoyancy Separation
-0.5
-1.8
+0.1
N.D.
-0.0
facs on lipid accumulation
Sorted No BODIPY Gate
-0.3
-1.6
-0.1
N.D.
-0.1
buoyancy on lipid accumulation
40 hrs Median Buoyancy
-0.1
-1.5
+0.1
N.D.
-0.1
growth on ricinoleic acid
YNB Ricinoleic Acid
-0.1
-0.6
+0.5
N.D.
-1.2
ypd buoyancy
40 hrs Low Buoyancy
-0.1
-0.6
-0.1
N.D.
-0.1
growth on oleic acid
YNB Oleic Acid
-0.2
-0.9
+0.1
N.D.
+0.0
growth on ricinoleic acid
YNB Methylricinoleic Acid
+0.0
-0.8
+0.3
N.D.
-0.4
auxotrophy
Dropout Complete
+0.1
-0.9
+0.1
N.D.
-0.1
auxotrophy
YNB Glucose
-0.0
-0.3
-0.1
N.D.
-0.2
growth on ricinoleic acid
YNB Glucose
-0.4
-0.2
+0.0
N.D.
-0.2
auxotrophy
YNB Glucose 75mM Arginine
+0.0
-0.4
+0.1
N.D.
-0.1
auxotrophy
YNB Glucose 75mM Methionine
-0.1
-0.2
-0.1
N.D.
+0.0
buoyancy on lipid accumulation
40 hrs High Buoyancy
+0.2
-1.0
+0.4
N.D.
+0.1
buoyancy on lipid accumulation
40 hrs No Buoyancy Separation
+0.4
-1.2
+0.5
N.D.
-0.0
ypd buoyancy
40 hrs Median Buoyancy
-0.5
-0.1
+0.3
N.D.
+0.1
growth on oleic acid
YNB Glucose
-0.4
+0.2
+0.4
N.D.
-0.1
ypd buoyancy
40 hrs High Buoyancy
-0.3
-0.1
+0.2
N.D.
+0.2
growth on ypd
YPD
-0.0
+0.1
+0.2
N.D.
+0.3
buoyancy on lipid accumulation
40 hrs Low Buoyancy
+0.3
+0.4
+0.5
N.D.
-0.0
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