Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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500 nt 9587 and 9588 are separated by 589 nucleotides9588 and 9589 are separated by 325 nucleotides9589 and 9590 are separated by 294 nucleotides9590 and 9591 are separated by 877 nucleotides mRNA_1219: 9587 - KOG3202 SNARE protein TLG1/Syntaxin 6, at 675,233 to 676,117 9587 mRNA_1220: 9588 - KOG0254 Predicted transporter (major facilitator superfamily), at 676,707 to 679,515 9588 mRNA_1221: 9589 - K01810 GPI, pgi glucose-6-phosphate isomerase, at 679,841 to 682,126 9589 mRNA_1222: 9590 - BLAST proteophosphoglycan ppg4 [Moniliophthora roreri M..., at 682,421 to 686,506 9590 mRNA_1223: 9591 - PRINTS-Proline rich extensin signature-PR01217, at 687,384 to 689,890 9591
Group Condition mRNA_1219 mRNA_1220 mRNA_1221 mRNA_1222 mRNA_1223
9587 9588 9589 9590 9591
growth on ricinoleic acid YNB Ricinoleic Acid N.D. -1.2 N.D. +0.4 -0.7
ypd buoyancy 40 hrs No Buoyancy Separation N.D. -0.0 N.D. -0.3 -0.8
growth on ricinoleic acid YNB Glucose N.D. -0.2 N.D. -0.3 -0.7
growth on ricinoleic acid YNB Methylricinoleic Acid N.D. -0.4 N.D. +0.1 -0.4
auxotrophy YNB Glucose 75mM Methionine N.D. +0.0 N.D. -0.0 -0.5
facs on lipid accumulation Sorted No BODIPY Gate N.D. -0.1 N.D. -0.1 -0.4
ypd buoyancy 40 hrs Low Buoyancy N.D. -0.1 N.D. +0.1 -0.3
growth on oleic acid YNB Glucose N.D. -0.1 N.D. -0.0 -0.2
facs on lipid accumulation Sorted High BODIPY Gate N.D. -0.1 N.D. -0.2 +0.0
auxotrophy YNB Glucose N.D. -0.2 N.D. +0.2 -0.3
growth on oleic acid YNB Oleic Acid N.D. +0.0 N.D. +0.0 -0.3
ypd buoyancy 40 hrs Median Buoyancy N.D. +0.1 N.D. -0.1 -0.3
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation N.D. -0.0 N.D. +0.1 -0.3
buoyancy on lipid accumulation 40 hrs Low Buoyancy N.D. -0.0 N.D. -0.0 -0.2
buoyancy on lipid accumulation 40 hrs High Buoyancy N.D. +0.1 N.D. +0.1 -0.4
auxotrophy YNB Glucose 75mM Arginine N.D. -0.1 N.D. +0.3 -0.2
auxotrophy Dropout Complete N.D. -0.1 N.D. +0.0 -0.0
buoyancy on lipid accumulation 40 hrs Median Buoyancy N.D. -0.1 N.D. +0.1 +0.0
facs on lipid accumulation Sorted Low BODIPY Gate N.D. -0.3 N.D. -0.0 +0.4
ypd buoyancy 40 hrs High Buoyancy N.D. +0.2 N.D. +0.2 -0.1
growth on ypd YPD N.D. +0.3 N.D. +0.3 -0.1
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