Fitness for 5 genes in Rhodosporidium toruloides IFO0880

Add gene:

Number of genes on each side:  

Top 21 experiments (either direction), sorted by average fitness

Or view all 21 experiments or choose conditions or try the comparative fitness browser

500 nt 9588 and 9589 are separated by 325 nucleotides9589 and 9590 are separated by 294 nucleotides9590 and 9591 are separated by 877 nucleotides9591 and 9592 are separated by 201 nucleotides mRNA_1220: 9588 - KOG0254 Predicted transporter (major facilitator superfamily), at 676,707 to 679,515 9588 mRNA_1221: 9589 - K01810 GPI, pgi glucose-6-phosphate isomerase, at 679,841 to 682,126 9589 mRNA_1222: 9590 - BLAST proteophosphoglycan ppg4 [Moniliophthora roreri M..., at 682,421 to 686,506 9590 mRNA_1223: 9591 - PRINTS-Proline rich extensin signature-PR01217, at 687,384 to 689,890 9591 mRNA_1224: 9592 - BLAST catalytic [Ascochyta rabiei], at 690,092 to 691,295 9592
Group Condition mRNA_1220 mRNA_1221 mRNA_1222 mRNA_1223 mRNA_1224
9588 9589 9590 9591 9592
growth on ricinoleic acid YNB Glucose -0.2 N.D. -0.3 -0.7 -0.3
growth on ricinoleic acid YNB Ricinoleic Acid -1.2 N.D. +0.4 -0.7 +0.2
ypd buoyancy 40 hrs No Buoyancy Separation -0.0 N.D. -0.3 -0.8 +0.2
growth on ricinoleic acid YNB Methylricinoleic Acid -0.4 N.D. +0.1 -0.4 +0.0
facs on lipid accumulation Sorted High BODIPY Gate -0.1 N.D. -0.2 +0.0 -0.3
buoyancy on lipid accumulation 40 hrs High Buoyancy +0.1 N.D. +0.1 -0.4 -0.4
auxotrophy YNB Glucose 75mM Methionine +0.0 N.D. -0.0 -0.5 -0.0
facs on lipid accumulation Sorted No BODIPY Gate -0.1 N.D. -0.1 -0.4 +0.0
growth on oleic acid YNB Glucose -0.1 N.D. -0.0 -0.2 -0.0
growth on oleic acid YNB Oleic Acid +0.0 N.D. +0.0 -0.3 -0.1
auxotrophy YNB Glucose -0.2 N.D. +0.2 -0.3 -0.0
buoyancy on lipid accumulation 40 hrs Low Buoyancy -0.0 N.D. -0.0 -0.2 -0.0
buoyancy on lipid accumulation 40 hrs Median Buoyancy -0.1 N.D. +0.1 +0.0 -0.2
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation -0.0 N.D. +0.1 -0.3 +0.0
ypd buoyancy 40 hrs Low Buoyancy -0.1 N.D. +0.1 -0.3 +0.2
ypd buoyancy 40 hrs Median Buoyancy +0.1 N.D. -0.1 -0.3 +0.1
auxotrophy Dropout Complete -0.1 N.D. +0.0 -0.0 +0.0
auxotrophy YNB Glucose 75mM Arginine -0.1 N.D. +0.3 -0.2 +0.0
ypd buoyancy 40 hrs High Buoyancy +0.2 N.D. +0.2 -0.1 -0.2
facs on lipid accumulation Sorted Low BODIPY Gate -0.3 N.D. -0.0 +0.4 +0.1
growth on ypd YPD +0.3 N.D. +0.3 -0.1 +0.8
remove
mRNA_1220
plot
remove
mRNA_1221
plot
remove
mRNA_1222
remove
mRNA_1223
plot
remove
mRNA_1224
plot