Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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500 nt 9589 and 9590 are separated by 294 nucleotides9590 and 9591 are separated by 877 nucleotides9591 and 9592 are separated by 201 nucleotides9592 and 9593 are separated by 146 nucleotides mRNA_1221: 9589 - K01810 GPI, pgi glucose-6-phosphate isomerase, at 679,841 to 682,126 9589 mRNA_1222: 9590 - BLAST proteophosphoglycan ppg4 [Moniliophthora roreri M..., at 682,421 to 686,506 9590 mRNA_1223: 9591 - PRINTS-Proline rich extensin signature-PR01217, at 687,384 to 689,890 9591 mRNA_1224: 9592 - BLAST catalytic [Ascochyta rabiei], at 690,092 to 691,295 9592 mRNA_1225: 9593 - KOG2195 Transferrin receptor and related proteins containing the protease-associated (PA) domain, at 691,442 to 693,362 9593
Group Condition mRNA_1221 mRNA_1222 mRNA_1223 mRNA_1224 mRNA_1225
9589 9590 9591 9592 9593
growth on ricinoleic acid YNB Glucose N.D. -0.3 -0.7 -0.3 -0.4
ypd buoyancy 40 hrs No Buoyancy Separation N.D. -0.3 -0.8 +0.2 -0.6
facs on lipid accumulation Sorted High BODIPY Gate N.D. -0.2 +0.0 -0.3 -0.9
ypd buoyancy 40 hrs Median Buoyancy N.D. -0.1 -0.3 +0.1 -0.5
growth on ricinoleic acid YNB Methylricinoleic Acid N.D. +0.1 -0.4 +0.0 -0.5
ypd buoyancy 40 hrs High Buoyancy N.D. +0.2 -0.1 -0.2 -0.7
facs on lipid accumulation Sorted No BODIPY Gate N.D. -0.1 -0.4 +0.0 -0.2
auxotrophy YNB Glucose 75mM Methionine N.D. -0.0 -0.5 -0.0 -0.0
ypd buoyancy 40 hrs Low Buoyancy N.D. +0.1 -0.3 +0.2 -0.4
growth on oleic acid YNB Oleic Acid N.D. +0.0 -0.3 -0.1 -0.1
growth on oleic acid YNB Glucose N.D. -0.0 -0.2 -0.0 -0.2
growth on ricinoleic acid YNB Ricinoleic Acid N.D. +0.4 -0.7 +0.2 -0.3
auxotrophy YNB Glucose 75mM Arginine N.D. +0.3 -0.2 +0.0 -0.5
auxotrophy YNB Glucose N.D. +0.2 -0.3 -0.0 -0.2
buoyancy on lipid accumulation 40 hrs High Buoyancy N.D. +0.1 -0.4 -0.4 +0.4
auxotrophy Dropout Complete N.D. +0.0 -0.0 +0.0 -0.2
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation N.D. +0.1 -0.3 +0.0 +0.2
buoyancy on lipid accumulation 40 hrs Low Buoyancy N.D. -0.0 -0.2 -0.0 +0.2
buoyancy on lipid accumulation 40 hrs Median Buoyancy N.D. +0.1 +0.0 -0.2 +0.3
facs on lipid accumulation Sorted Low BODIPY Gate N.D. -0.0 +0.4 +0.1 -0.2
growth on ypd YPD N.D. +0.3 -0.1 +0.8 +0.5
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