Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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Top 21 experiments (either direction), sorted by average fitness

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500 nt 9590 and 9591 are separated by 877 nucleotides9591 and 9592 are separated by 201 nucleotides9592 and 9593 are separated by 146 nucleotides9593 and 9594 are separated by 421 nucleotides mRNA_1222: 9590 - BLAST proteophosphoglycan ppg4 [Moniliophthora roreri M..., at 682,421 to 686,506 9590 mRNA_1223: 9591 - PRINTS-Proline rich extensin signature-PR01217, at 687,384 to 689,890 9591 mRNA_1224: 9592 - BLAST catalytic [Ascochyta rabiei], at 690,092 to 691,295 9592 mRNA_1225: 9593 - KOG2195 Transferrin receptor and related proteins containing the protease-associated (PA) domain, at 691,442 to 693,362 9593 mRNA_1226: 9594 - K01262 pepP Xaa-Pro aminopeptidase, at 693,784 to 696,236 9594
Group Condition mRNA_1222 mRNA_1223 mRNA_1224 mRNA_1225 mRNA_1226
9590 9591 9592 9593 9594
growth on ricinoleic acid YNB Glucose -0.3 -0.7 -0.3 -0.4 -0.6
facs on lipid accumulation Sorted High BODIPY Gate -0.2 +0.0 -0.3 -0.9 -0.2
ypd buoyancy 40 hrs No Buoyancy Separation -0.3 -0.8 +0.2 -0.6 +0.2
growth on oleic acid YNB Glucose -0.0 -0.2 -0.0 -0.2 -0.5
growth on oleic acid YNB Oleic Acid +0.0 -0.3 -0.1 -0.1 -0.4
ypd buoyancy 40 hrs Median Buoyancy -0.1 -0.3 +0.1 -0.5 +0.0
auxotrophy YNB Glucose +0.2 -0.3 -0.0 -0.2 -0.5
growth on ricinoleic acid YNB Methylricinoleic Acid +0.1 -0.4 +0.0 -0.5 +0.1
auxotrophy YNB Glucose 75mM Methionine -0.0 -0.5 -0.0 -0.0 -0.1
auxotrophy Dropout Complete +0.0 -0.0 +0.0 -0.2 -0.4
auxotrophy YNB Glucose 75mM Arginine +0.3 -0.2 +0.0 -0.5 -0.2
ypd buoyancy 40 hrs High Buoyancy +0.2 -0.1 -0.2 -0.7 +0.2
growth on ricinoleic acid YNB Ricinoleic Acid +0.4 -0.7 +0.2 -0.3 -0.1
ypd buoyancy 40 hrs Low Buoyancy +0.1 -0.3 +0.2 -0.4 +0.0
facs on lipid accumulation Sorted No BODIPY Gate -0.1 -0.4 +0.0 -0.2 +0.2
buoyancy on lipid accumulation 40 hrs High Buoyancy +0.1 -0.4 -0.4 +0.4 +0.0
facs on lipid accumulation Sorted Low BODIPY Gate -0.0 +0.4 +0.1 -0.2 -0.2
buoyancy on lipid accumulation 40 hrs Median Buoyancy +0.1 +0.0 -0.2 +0.3 +0.0
buoyancy on lipid accumulation 40 hrs Low Buoyancy -0.0 -0.2 -0.0 +0.2 +0.2
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation +0.1 -0.3 +0.0 +0.2 +0.3
growth on ypd YPD +0.3 -0.1 +0.8 +0.5 -0.0
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