Fitness Browser
Home
Find Gene
BLAST
Experiments
Organisms
Help
Gene
Fitness
Nearby
Cofit
Protein
Homologs
Fitness for 5 genes in
Rhodosporidium toruloides IFO0880
Add gene:
Go
Number of genes on each side:
1
2
3
4
5
Go
Top 21 experiments (either direction), sorted by average fitness
Or view
all 21 experiments
or
choose conditions
or try the
comparative fitness browser
500 nt
9590 and 9591 are separated by 877 nucleotides
9591 and 9592 are separated by 201 nucleotides
9592 and 9593 are separated by 146 nucleotides
9593 and 9594 are separated by 421 nucleotides
mRNA_1222: 9590 - BLAST proteophosphoglycan ppg4 [Moniliophthora roreri M..., at 682,421 to 686,506
9590
mRNA_1223: 9591 - PRINTS-Proline rich extensin signature-PR01217, at 687,384 to 689,890
9591
mRNA_1224: 9592 - BLAST catalytic [Ascochyta rabiei], at 690,092 to 691,295
9592
mRNA_1225: 9593 - KOG2195 Transferrin receptor and related proteins containing the protease-associated (PA) domain, at 691,442 to 693,362
9593
mRNA_1226: 9594 - K01262 pepP Xaa-Pro aminopeptidase, at 693,784 to 696,236
9594
Group
Condition
mRNA
_1222
mRNA
_1223
mRNA
_1224
mRNA
_1225
mRNA
_1226
9590
9591
9592
9593
9594
growth on ricinoleic acid
YNB Glucose
-0.3
-0.7
-0.3
-0.4
-0.6
facs on lipid accumulation
Sorted High BODIPY Gate
-0.2
+0.0
-0.3
-0.9
-0.2
ypd buoyancy
40 hrs No Buoyancy Separation
-0.3
-0.8
+0.2
-0.6
+0.2
growth on oleic acid
YNB Glucose
-0.0
-0.2
-0.0
-0.2
-0.5
growth on oleic acid
YNB Oleic Acid
+0.0
-0.3
-0.1
-0.1
-0.4
ypd buoyancy
40 hrs Median Buoyancy
-0.1
-0.3
+0.1
-0.5
+0.0
auxotrophy
YNB Glucose
+0.2
-0.3
-0.0
-0.2
-0.5
growth on ricinoleic acid
YNB Methylricinoleic Acid
+0.1
-0.4
+0.0
-0.5
+0.1
auxotrophy
YNB Glucose 75mM Methionine
-0.0
-0.5
-0.0
-0.0
-0.1
auxotrophy
Dropout Complete
+0.0
-0.0
+0.0
-0.2
-0.4
auxotrophy
YNB Glucose 75mM Arginine
+0.3
-0.2
+0.0
-0.5
-0.2
ypd buoyancy
40 hrs High Buoyancy
+0.2
-0.1
-0.2
-0.7
+0.2
growth on ricinoleic acid
YNB Ricinoleic Acid
+0.4
-0.7
+0.2
-0.3
-0.1
ypd buoyancy
40 hrs Low Buoyancy
+0.1
-0.3
+0.2
-0.4
+0.0
facs on lipid accumulation
Sorted No BODIPY Gate
-0.1
-0.4
+0.0
-0.2
+0.2
buoyancy on lipid accumulation
40 hrs High Buoyancy
+0.1
-0.4
-0.4
+0.4
+0.0
facs on lipid accumulation
Sorted Low BODIPY Gate
-0.0
+0.4
+0.1
-0.2
-0.2
buoyancy on lipid accumulation
40 hrs Median Buoyancy
+0.1
+0.0
-0.2
+0.3
+0.0
buoyancy on lipid accumulation
40 hrs Low Buoyancy
-0.0
-0.2
-0.0
+0.2
+0.2
buoyancy on lipid accumulation
40 hrs No Buoyancy Separation
+0.1
-0.3
+0.0
+0.2
+0.3
growth on ypd
YPD
+0.3
-0.1
+0.8
+0.5
-0.0
remove
mRNA_1222
plot
remove
mRNA_1223
plot
remove
mRNA_1224
remove
mRNA_1225
plot
remove
mRNA_1226
plot