Fitness for 5 genes in Rhodosporidium toruloides IFO0880

Add gene:

Number of genes on each side:  

Top 21 experiments (either direction), sorted by average fitness

Or view all 21 experiments or choose conditions or try the comparative fitness browser

500 nt 9591 and 9592 are separated by 201 nucleotides9592 and 9593 are separated by 146 nucleotides9593 and 9594 are separated by 421 nucleotides9594 and 9595 are separated by 392 nucleotides mRNA_1223: 9591 - PRINTS-Proline rich extensin signature-PR01217, at 687,384 to 689,890 9591 mRNA_1224: 9592 - BLAST catalytic [Ascochyta rabiei], at 690,092 to 691,295 9592 mRNA_1225: 9593 - KOG2195 Transferrin receptor and related proteins containing the protease-associated (PA) domain, at 691,442 to 693,362 9593 mRNA_1226: 9594 - K01262 pepP Xaa-Pro aminopeptidase, at 693,784 to 696,236 9594 mRNA_1227: 9595 - KOG1318 Helix loop helix transcription factor EB, at 696,629 to 699,042 9595
Group Condition mRNA_1223 mRNA_1224 mRNA_1225 mRNA_1226 mRNA_1227
9591 9592 9593 9594 9595
growth on ricinoleic acid YNB Glucose -0.7 -0.3 -0.4 -0.6 -0.3
auxotrophy YNB Glucose -0.3 -0.0 -0.2 -0.5 -0.7
auxotrophy YNB Glucose 75mM Arginine -0.2 +0.0 -0.5 -0.2 -0.8
auxotrophy Dropout Complete -0.0 +0.0 -0.2 -0.4 -0.8
ypd buoyancy 40 hrs No Buoyancy Separation -0.8 +0.2 -0.6 +0.2 -0.1
growth on oleic acid YNB Glucose -0.2 -0.0 -0.2 -0.5 -0.2
growth on oleic acid YNB Oleic Acid -0.3 -0.1 -0.1 -0.4 -0.0
auxotrophy YNB Glucose 75mM Methionine -0.5 -0.0 -0.0 -0.1 -0.3
facs on lipid accumulation Sorted High BODIPY Gate +0.0 -0.3 -0.9 -0.2 +0.5
ypd buoyancy 40 hrs High Buoyancy -0.1 -0.2 -0.7 +0.2 +0.1
ypd buoyancy 40 hrs Median Buoyancy -0.3 +0.1 -0.5 +0.0 +0.1
growth on ricinoleic acid YNB Methylricinoleic Acid -0.4 +0.0 -0.5 +0.1 +0.2
growth on ricinoleic acid YNB Ricinoleic Acid -0.7 +0.2 -0.3 -0.1 +0.5
buoyancy on lipid accumulation 40 hrs High Buoyancy -0.4 -0.4 +0.4 +0.0 +0.1
facs on lipid accumulation Sorted Low BODIPY Gate +0.4 +0.1 -0.2 -0.2 -0.5
ypd buoyancy 40 hrs Low Buoyancy -0.3 +0.2 -0.4 +0.0 +0.3
facs on lipid accumulation Sorted No BODIPY Gate -0.4 +0.0 -0.2 +0.2 +0.6
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation -0.3 +0.0 +0.2 +0.3 +0.3
buoyancy on lipid accumulation 40 hrs Median Buoyancy +0.0 -0.2 +0.3 +0.0 +0.4
buoyancy on lipid accumulation 40 hrs Low Buoyancy -0.2 -0.0 +0.2 +0.2 +0.6
growth on ypd YPD -0.1 +0.8 +0.5 -0.0 +0.6
remove
mRNA_1223
plot
remove
mRNA_1224
plot
remove
mRNA_1225
remove
mRNA_1226
plot
remove
mRNA_1227
plot