Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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500 nt 9592 and 9593 are separated by 146 nucleotides9593 and 9594 are separated by 421 nucleotides9594 and 9595 are separated by 392 nucleotides9595 and 9596 are separated by 544 nucleotides mRNA_1224: 9592 - BLAST catalytic [Ascochyta rabiei], at 690,092 to 691,295 9592 mRNA_1225: 9593 - KOG2195 Transferrin receptor and related proteins containing the protease-associated (PA) domain, at 691,442 to 693,362 9593 mRNA_1226: 9594 - K01262 pepP Xaa-Pro aminopeptidase, at 693,784 to 696,236 9594 mRNA_1227: 9595 - KOG1318 Helix loop helix transcription factor EB, at 696,629 to 699,042 9595 mRNA_1228: 9596 - K00693 GYS glycogen synthase, at 699,587 to 703,104 9596
Group Condition mRNA_1224 mRNA_1225 mRNA_1226 mRNA_1227 mRNA_1228
9592 9593 9594 9595 9596
ypd buoyancy 40 hrs Low Buoyancy +0.2 -0.4 +0.0 +0.3 -3.9
growth on ricinoleic acid YNB Ricinoleic Acid +0.2 -0.3 -0.1 +0.5 -2.8
growth on ricinoleic acid YNB Methylricinoleic Acid +0.0 -0.5 +0.1 +0.2 -1.7
growth on oleic acid YNB Oleic Acid -0.1 -0.1 -0.4 -0.0 -1.1
ypd buoyancy 40 hrs No Buoyancy Separation +0.2 -0.6 +0.2 -0.1 -1.3
growth on ricinoleic acid YNB Glucose -0.3 -0.4 -0.6 -0.3 +0.3
facs on lipid accumulation Sorted High BODIPY Gate -0.3 -0.9 -0.2 +0.5 -0.4
auxotrophy YNB Glucose 75mM Arginine +0.0 -0.5 -0.2 -0.8 +0.3
auxotrophy YNB Glucose -0.0 -0.2 -0.5 -0.7 +0.5
facs on lipid accumulation Sorted Low BODIPY Gate +0.1 -0.2 -0.2 -0.5 -0.1
auxotrophy Dropout Complete +0.0 -0.2 -0.4 -0.8 +0.6
ypd buoyancy 40 hrs Median Buoyancy +0.1 -0.5 +0.0 +0.1 -0.6
growth on oleic acid YNB Glucose -0.0 -0.2 -0.5 -0.2 +0.6
ypd buoyancy 40 hrs High Buoyancy -0.2 -0.7 +0.2 +0.1 +0.4
buoyancy on lipid accumulation 40 hrs High Buoyancy -0.4 +0.4 +0.0 +0.1 -0.1
auxotrophy YNB Glucose 75mM Methionine -0.0 -0.0 -0.1 -0.3 +0.4
facs on lipid accumulation Sorted No BODIPY Gate +0.0 -0.2 +0.2 +0.6 -0.3
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation +0.0 +0.2 +0.3 +0.3 -0.3
buoyancy on lipid accumulation 40 hrs Low Buoyancy -0.0 +0.2 +0.2 +0.6 -0.4
buoyancy on lipid accumulation 40 hrs Median Buoyancy -0.2 +0.3 +0.0 +0.4 +0.2
growth on ypd YPD +0.8 +0.5 -0.0 +0.6 -0.0
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