Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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500 nt 9593 and 9594 are separated by 421 nucleotides9594 and 9595 are separated by 392 nucleotides9595 and 9596 are separated by 544 nucleotides9596 and 9597 are separated by 347 nucleotides mRNA_1225: 9593 - KOG2195 Transferrin receptor and related proteins containing the protease-associated (PA) domain, at 691,442 to 693,362 9593 mRNA_1226: 9594 - K01262 pepP Xaa-Pro aminopeptidase, at 693,784 to 696,236 9594 mRNA_1227: 9595 - KOG1318 Helix loop helix transcription factor EB, at 696,629 to 699,042 9595 mRNA_1228: 9596 - K00693 GYS glycogen synthase, at 699,587 to 703,104 9596 mRNA_1229: 9597 - SUPERFAMILY--SSF52047, at 703,452 to 704,884 9597
Group Condition mRNA_1225 mRNA_1226 mRNA_1227 mRNA_1228 mRNA_1229
9593 9594 9595 9596 9597
ypd buoyancy 40 hrs Low Buoyancy -0.4 +0.0 +0.3 -3.9 +0.1
growth on ricinoleic acid YNB Ricinoleic Acid -0.3 -0.1 +0.5 -2.8 +0.0
growth on ricinoleic acid YNB Methylricinoleic Acid -0.5 +0.1 +0.2 -1.7 -0.4
growth on oleic acid YNB Oleic Acid -0.1 -0.4 -0.0 -1.1 +0.1
ypd buoyancy 40 hrs No Buoyancy Separation -0.6 +0.2 -0.1 -1.3 +0.3
auxotrophy YNB Glucose 75mM Arginine -0.5 -0.2 -0.8 +0.3 +0.0
growth on ricinoleic acid YNB Glucose -0.4 -0.6 -0.3 +0.3 -0.1
ypd buoyancy 40 hrs Median Buoyancy -0.5 +0.0 +0.1 -0.6 -0.0
auxotrophy YNB Glucose -0.2 -0.5 -0.7 +0.5 +0.1
auxotrophy Dropout Complete -0.2 -0.4 -0.8 +0.6 +0.0
facs on lipid accumulation Sorted High BODIPY Gate -0.9 -0.2 +0.5 -0.4 +0.1
facs on lipid accumulation Sorted Low BODIPY Gate -0.2 -0.2 -0.5 -0.1 +0.2
growth on oleic acid YNB Glucose -0.2 -0.5 -0.2 +0.6 -0.0
ypd buoyancy 40 hrs High Buoyancy -0.7 +0.2 +0.1 +0.4 -0.1
auxotrophy YNB Glucose 75mM Methionine -0.0 -0.1 -0.3 +0.4 +0.0
facs on lipid accumulation Sorted No BODIPY Gate -0.2 +0.2 +0.6 -0.3 -0.1
buoyancy on lipid accumulation 40 hrs High Buoyancy +0.4 +0.0 +0.1 -0.1 -0.2
buoyancy on lipid accumulation 40 hrs Low Buoyancy +0.2 +0.2 +0.6 -0.4 -0.2
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation +0.2 +0.3 +0.3 -0.3 +0.1
growth on ypd YPD +0.5 -0.0 +0.6 -0.0 -0.2
buoyancy on lipid accumulation 40 hrs Median Buoyancy +0.3 +0.0 +0.4 +0.2 -0.0
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