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Protein
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Fitness for 5 genes in
Rhodosporidium toruloides IFO0880
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Top 21 experiments (either direction), sorted by average fitness
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500 nt
9594 and 9595 are separated by 392 nucleotides
9595 and 9596 are separated by 544 nucleotides
9596 and 9597 are separated by 347 nucleotides
9597 and 9598 are separated by 1049 nucleotides
mRNA_1226: 9594 - K01262 pepP Xaa-Pro aminopeptidase, at 693,784 to 696,236
9594
mRNA_1227: 9595 - KOG1318 Helix loop helix transcription factor EB, at 696,629 to 699,042
9595
mRNA_1228: 9596 - K00693 GYS glycogen synthase, at 699,587 to 703,104
9596
mRNA_1229: 9597 - SUPERFAMILY--SSF52047, at 703,452 to 704,884
9597
mRNA_1230: 9598 - K03267 ERF3, GSPT peptide chain release factor subunit 3, at 705,934 to 708,882
9598
Group
Condition
mRNA
_1226
mRNA
_1227
mRNA
_1228
mRNA
_1229
mRNA
_1230
9594
9595
9596
9597
9598
ypd buoyancy
40 hrs Low Buoyancy
+0.0
+0.3
-3.9
+0.1
N.D.
growth on ricinoleic acid
YNB Ricinoleic Acid
-0.1
+0.5
-2.8
+0.0
N.D.
growth on ricinoleic acid
YNB Methylricinoleic Acid
+0.1
+0.2
-1.7
-0.4
N.D.
growth on oleic acid
YNB Oleic Acid
-0.4
-0.0
-1.1
+0.1
N.D.
ypd buoyancy
40 hrs No Buoyancy Separation
+0.2
-0.1
-1.3
+0.3
N.D.
growth on ricinoleic acid
YNB Glucose
-0.6
-0.3
+0.3
-0.1
N.D.
auxotrophy
YNB Glucose 75mM Arginine
-0.2
-0.8
+0.3
+0.0
N.D.
auxotrophy
YNB Glucose
-0.5
-0.7
+0.5
+0.1
N.D.
auxotrophy
Dropout Complete
-0.4
-0.8
+0.6
+0.0
N.D.
facs on lipid accumulation
Sorted Low BODIPY Gate
-0.2
-0.5
-0.1
+0.2
N.D.
ypd buoyancy
40 hrs Median Buoyancy
+0.0
+0.1
-0.6
-0.0
N.D.
buoyancy on lipid accumulation
40 hrs High Buoyancy
+0.0
+0.1
-0.1
-0.2
N.D.
growth on oleic acid
YNB Glucose
-0.5
-0.2
+0.6
-0.0
N.D.
facs on lipid accumulation
Sorted High BODIPY Gate
-0.2
+0.5
-0.4
+0.1
N.D.
auxotrophy
YNB Glucose 75mM Methionine
-0.1
-0.3
+0.4
+0.0
N.D.
buoyancy on lipid accumulation
40 hrs Low Buoyancy
+0.2
+0.6
-0.4
-0.2
N.D.
facs on lipid accumulation
Sorted No BODIPY Gate
+0.2
+0.6
-0.3
-0.1
N.D.
growth on ypd
YPD
-0.0
+0.6
-0.0
-0.2
N.D.
buoyancy on lipid accumulation
40 hrs No Buoyancy Separation
+0.3
+0.3
-0.3
+0.1
N.D.
ypd buoyancy
40 hrs High Buoyancy
+0.2
+0.1
+0.4
-0.1
N.D.
buoyancy on lipid accumulation
40 hrs Median Buoyancy
+0.0
+0.4
+0.2
-0.0
N.D.
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