Fitness for 5 genes in Rhodosporidium toruloides IFO0880

Add gene:

Number of genes on each side:  

Top 21 experiments (either direction), sorted by average fitness

Or view all 21 experiments or choose conditions or try the comparative fitness browser

500 nt 9594 and 9595 are separated by 392 nucleotides9595 and 9596 are separated by 544 nucleotides9596 and 9597 are separated by 347 nucleotides9597 and 9598 are separated by 1049 nucleotides mRNA_1226: 9594 - K01262 pepP Xaa-Pro aminopeptidase, at 693,784 to 696,236 9594 mRNA_1227: 9595 - KOG1318 Helix loop helix transcription factor EB, at 696,629 to 699,042 9595 mRNA_1228: 9596 - K00693 GYS glycogen synthase, at 699,587 to 703,104 9596 mRNA_1229: 9597 - SUPERFAMILY--SSF52047, at 703,452 to 704,884 9597 mRNA_1230: 9598 - K03267 ERF3, GSPT peptide chain release factor subunit 3, at 705,934 to 708,882 9598
Group Condition mRNA_1226 mRNA_1227 mRNA_1228 mRNA_1229 mRNA_1230
9594 9595 9596 9597 9598
ypd buoyancy 40 hrs Low Buoyancy +0.0 +0.3 -3.9 +0.1 N.D.
growth on ricinoleic acid YNB Ricinoleic Acid -0.1 +0.5 -2.8 +0.0 N.D.
growth on ricinoleic acid YNB Methylricinoleic Acid +0.1 +0.2 -1.7 -0.4 N.D.
growth on oleic acid YNB Oleic Acid -0.4 -0.0 -1.1 +0.1 N.D.
ypd buoyancy 40 hrs No Buoyancy Separation +0.2 -0.1 -1.3 +0.3 N.D.
growth on ricinoleic acid YNB Glucose -0.6 -0.3 +0.3 -0.1 N.D.
auxotrophy YNB Glucose 75mM Arginine -0.2 -0.8 +0.3 +0.0 N.D.
auxotrophy YNB Glucose -0.5 -0.7 +0.5 +0.1 N.D.
auxotrophy Dropout Complete -0.4 -0.8 +0.6 +0.0 N.D.
facs on lipid accumulation Sorted Low BODIPY Gate -0.2 -0.5 -0.1 +0.2 N.D.
ypd buoyancy 40 hrs Median Buoyancy +0.0 +0.1 -0.6 -0.0 N.D.
buoyancy on lipid accumulation 40 hrs High Buoyancy +0.0 +0.1 -0.1 -0.2 N.D.
growth on oleic acid YNB Glucose -0.5 -0.2 +0.6 -0.0 N.D.
facs on lipid accumulation Sorted High BODIPY Gate -0.2 +0.5 -0.4 +0.1 N.D.
auxotrophy YNB Glucose 75mM Methionine -0.1 -0.3 +0.4 +0.0 N.D.
buoyancy on lipid accumulation 40 hrs Low Buoyancy +0.2 +0.6 -0.4 -0.2 N.D.
facs on lipid accumulation Sorted No BODIPY Gate +0.2 +0.6 -0.3 -0.1 N.D.
growth on ypd YPD -0.0 +0.6 -0.0 -0.2 N.D.
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation +0.3 +0.3 -0.3 +0.1 N.D.
ypd buoyancy 40 hrs High Buoyancy +0.2 +0.1 +0.4 -0.1 N.D.
buoyancy on lipid accumulation 40 hrs Median Buoyancy +0.0 +0.4 +0.2 -0.0 N.D.
remove
mRNA_1226
plot
remove
mRNA_1227
plot
remove
mRNA_1228
remove
mRNA_1229
plot
remove
mRNA_1230
plot