Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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500 nt 9595 and 9596 are separated by 544 nucleotides9596 and 9597 are separated by 347 nucleotides9597 and 9598 are separated by 1049 nucleotides9598 and 9599 are separated by 174 nucleotides mRNA_1227: 9595 - KOG1318 Helix loop helix transcription factor EB, at 696,629 to 699,042 9595 mRNA_1228: 9596 - K00693 GYS glycogen synthase, at 699,587 to 703,104 9596 mRNA_1229: 9597 - SUPERFAMILY--SSF52047, at 703,452 to 704,884 9597 mRNA_1230: 9598 - K03267 ERF3, GSPT peptide chain release factor subunit 3, at 705,934 to 708,882 9598 mRNA_1231: 9599 - K11086 SNRPB, SMB small nuclear ribonucleoprotein B and B', at 709,057 to 710,079 9599
Group Condition mRNA_1227 mRNA_1228 mRNA_1229 mRNA_1230 mRNA_1231
9595 9596 9597 9598 9599
ypd buoyancy 40 hrs Low Buoyancy +0.3 -3.9 +0.1 N.D. N.D.
growth on ricinoleic acid YNB Ricinoleic Acid +0.5 -2.8 +0.0 N.D. N.D.
growth on ricinoleic acid YNB Methylricinoleic Acid +0.2 -1.7 -0.4 N.D. N.D.
ypd buoyancy 40 hrs No Buoyancy Separation -0.1 -1.3 +0.3 N.D. N.D.
growth on oleic acid YNB Oleic Acid -0.0 -1.1 +0.1 N.D. N.D.
ypd buoyancy 40 hrs Median Buoyancy +0.1 -0.6 -0.0 N.D. N.D.
auxotrophy YNB Glucose 75mM Arginine -0.8 +0.3 +0.0 N.D. N.D.
facs on lipid accumulation Sorted Low BODIPY Gate -0.5 -0.1 +0.2 N.D. N.D.
buoyancy on lipid accumulation 40 hrs High Buoyancy +0.1 -0.1 -0.2 N.D. N.D.
auxotrophy YNB Glucose -0.7 +0.5 +0.1 N.D. N.D.
auxotrophy Dropout Complete -0.8 +0.6 +0.0 N.D. N.D.
growth on ricinoleic acid YNB Glucose -0.3 +0.3 -0.1 N.D. N.D.
buoyancy on lipid accumulation 40 hrs Low Buoyancy +0.6 -0.4 -0.2 N.D. N.D.
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation +0.3 -0.3 +0.1 N.D. N.D.
auxotrophy YNB Glucose 75mM Methionine -0.3 +0.4 +0.0 N.D. N.D.
facs on lipid accumulation Sorted No BODIPY Gate +0.6 -0.3 -0.1 N.D. N.D.
facs on lipid accumulation Sorted High BODIPY Gate +0.5 -0.4 +0.1 N.D. N.D.
growth on oleic acid YNB Glucose -0.2 +0.6 -0.0 N.D. N.D.
ypd buoyancy 40 hrs High Buoyancy +0.1 +0.4 -0.1 N.D. N.D.
growth on ypd YPD +0.6 -0.0 -0.2 N.D. N.D.
buoyancy on lipid accumulation 40 hrs Median Buoyancy +0.4 +0.2 -0.0 N.D. N.D.
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