Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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500 nt 9597 and 9598 are separated by 1049 nucleotides9598 and 9599 are separated by 174 nucleotides9599 and 9600 are separated by 363 nucleotides9600 and 9601 are separated by 226 nucleotides mRNA_1229: 9597 - SUPERFAMILY--SSF52047, at 703,452 to 704,884 9597 mRNA_1230: 9598 - K03267 ERF3, GSPT peptide chain release factor subunit 3, at 705,934 to 708,882 9598 mRNA_1231: 9599 - K11086 SNRPB, SMB small nuclear ribonucleoprotein B and B', at 709,057 to 710,079 9599 mRNA_1232: 9600 - K12177 COPS3, CSN3 COP9 signalosome complex subunit 3, at 710,443 to 712,961 9600 mRNA_1233: 9601 - KOG1502 Flavonol reductase/cinnamoyl-CoA reductase, at 713,188 to 714,152 9601
Group Condition mRNA_1229 mRNA_1230 mRNA_1231 mRNA_1232 mRNA_1233
9597 9598 9599 9600 9601
growth on ricinoleic acid YNB Methylricinoleic Acid -0.4 N.D. N.D. -1.3 N.D.
buoyancy on lipid accumulation 40 hrs Low Buoyancy -0.2 N.D. N.D. -1.2 N.D.
growth on ricinoleic acid YNB Glucose -0.1 N.D. N.D. -1.2 N.D.
growth on ricinoleic acid YNB Ricinoleic Acid +0.0 N.D. N.D. -1.2 N.D.
facs on lipid accumulation Sorted No BODIPY Gate -0.1 N.D. N.D. -0.9 N.D.
auxotrophy YNB Glucose 75mM Methionine +0.0 N.D. N.D. -0.8 N.D.
auxotrophy YNB Glucose +0.1 N.D. N.D. -0.7 N.D.
auxotrophy Dropout Complete +0.0 N.D. N.D. -0.7 N.D.
facs on lipid accumulation Sorted Low BODIPY Gate +0.2 N.D. N.D. -0.9 N.D.
ypd buoyancy 40 hrs High Buoyancy -0.1 N.D. N.D. -0.5 N.D.
growth on oleic acid YNB Oleic Acid +0.1 N.D. N.D. -0.6 N.D.
growth on oleic acid YNB Glucose -0.0 N.D. N.D. -0.4 N.D.
auxotrophy YNB Glucose 75mM Arginine +0.0 N.D. N.D. -0.4 N.D.
ypd buoyancy 40 hrs No Buoyancy Separation +0.3 N.D. N.D. -0.6 N.D.
ypd buoyancy 40 hrs Median Buoyancy -0.0 N.D. N.D. -0.2 N.D.
facs on lipid accumulation Sorted High BODIPY Gate +0.1 N.D. N.D. -0.3 N.D.
growth on ypd YPD -0.2 N.D. N.D. +0.1 N.D.
buoyancy on lipid accumulation 40 hrs High Buoyancy -0.2 N.D. N.D. +0.2 N.D.
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation +0.1 N.D. N.D. +0.0 N.D.
buoyancy on lipid accumulation 40 hrs Median Buoyancy -0.0 N.D. N.D. +0.2 N.D.
ypd buoyancy 40 hrs Low Buoyancy +0.1 N.D. N.D. +0.1 N.D.
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