Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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500 nt 9599 and 9600 are separated by 363 nucleotides9600 and 9601 are separated by 226 nucleotides9601 and 9602 are separated by 506 nucleotides9602 and 9603 are separated by 562 nucleotides mRNA_1231: 9599 - K11086 SNRPB, SMB small nuclear ribonucleoprotein B and B', at 709,057 to 710,079 9599 mRNA_1232: 9600 - K12177 COPS3, CSN3 COP9 signalosome complex subunit 3, at 710,443 to 712,961 9600 mRNA_1233: 9601 - KOG1502 Flavonol reductase/cinnamoyl-CoA reductase, at 713,188 to 714,152 9601 mRNA_1234: 9602 - KOG1502 Flavonol reductase/cinnamoyl-CoA reductase, at 714,659 to 715,622 9602 mRNA_1235: 9603 - K12818 DHX8, PRP22 ATP-dependent RNA helicase DHX8/PRP22, at 716,185 to 721,769 9603
Group Condition mRNA_1231 mRNA_1232 mRNA_1233 mRNA_1234 mRNA_1235
9599 9600 9601 9602 9603
growth on ricinoleic acid YNB Glucose N.D. -1.2 N.D. -0.8 -0.3
growth on ricinoleic acid YNB Methylricinoleic Acid N.D. -1.3 N.D. -0.4 +0.0
growth on ricinoleic acid YNB Ricinoleic Acid N.D. -1.2 N.D. -0.3 -0.1
buoyancy on lipid accumulation 40 hrs Low Buoyancy N.D. -1.2 N.D. -0.4 +0.4
auxotrophy YNB Glucose 75mM Methionine N.D. -0.8 N.D. -0.2 +0.2
ypd buoyancy 40 hrs High Buoyancy N.D. -0.5 N.D. -0.4 -0.0
facs on lipid accumulation Sorted Low BODIPY Gate N.D. -0.9 N.D. +0.6 -0.3
facs on lipid accumulation Sorted High BODIPY Gate N.D. -0.3 N.D. +0.1 -0.2
ypd buoyancy 40 hrs Median Buoyancy N.D. -0.2 N.D. -0.3 +0.1
facs on lipid accumulation Sorted No BODIPY Gate N.D. -0.9 N.D. +0.4 +0.2
auxotrophy YNB Glucose N.D. -0.7 N.D. -0.2 +0.7
auxotrophy Dropout Complete N.D. -0.7 N.D. -0.0 +0.6
growth on oleic acid YNB Oleic Acid N.D. -0.6 N.D. +0.1 +0.4
buoyancy on lipid accumulation 40 hrs High Buoyancy N.D. +0.2 N.D. -0.5 +0.2
ypd buoyancy 40 hrs No Buoyancy Separation N.D. -0.6 N.D. +0.5 +0.2
auxotrophy YNB Glucose 75mM Arginine N.D. -0.4 N.D. +0.1 +0.4
ypd buoyancy 40 hrs Low Buoyancy N.D. +0.1 N.D. +0.2 -0.2
growth on ypd YPD N.D. +0.1 N.D. +0.0 +0.3
growth on oleic acid YNB Glucose N.D. -0.4 N.D. +0.4 +0.5
buoyancy on lipid accumulation 40 hrs Median Buoyancy N.D. +0.2 N.D. -0.3 +0.5
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation N.D. +0.0 N.D. +0.6 +0.5
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