Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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500 nt 9602 and 9603 are separated by 562 nucleotides9603 and 9604 are separated by 491 nucleotides9604 and 9605 are separated by 271 nucleotides9605 and 9606 are separated by 624 nucleotides mRNA_1234: 9602 - KOG1502 Flavonol reductase/cinnamoyl-CoA reductase, at 714,659 to 715,622 9602 mRNA_1235: 9603 - K12818 DHX8, PRP22 ATP-dependent RNA helicase DHX8/PRP22, at 716,185 to 721,769 9603 mRNA_1236: 9604 - K02377 TSTA3, fcl GDP-L-fucose synthase, at 722,261 to 724,161 9604 mRNA_1237: 9605 - SUPERFAMILY--SSF52047, at 724,433 to 725,551 9605 mRNA_1238: 9606 - SUPERFAMILY--SSF52047, at 726,176 to 728,961 9606
Group Condition mRNA_1234 mRNA_1235 mRNA_1236 mRNA_1237 mRNA_1238
9602 9603 9604 9605 9606
growth on ricinoleic acid YNB Glucose -0.8 -0.3 N.D. -0.3 -0.1
growth on ricinoleic acid YNB Methylricinoleic Acid -0.4 +0.0 N.D. -0.2 -0.1
growth on ricinoleic acid YNB Ricinoleic Acid -0.3 -0.1 N.D. -0.2 -0.2
facs on lipid accumulation Sorted High BODIPY Gate +0.1 -0.2 N.D. -0.1 -0.2
auxotrophy YNB Glucose 75mM Methionine -0.2 +0.2 N.D. -0.4 -0.1
ypd buoyancy 40 hrs High Buoyancy -0.4 -0.0 N.D. +0.1 -0.1
buoyancy on lipid accumulation 40 hrs High Buoyancy -0.5 +0.2 N.D. +0.1 -0.0
ypd buoyancy 40 hrs Median Buoyancy -0.3 +0.1 N.D. +0.1 -0.0
facs on lipid accumulation Sorted Low BODIPY Gate +0.6 -0.3 N.D. -0.2 -0.1
ypd buoyancy 40 hrs Low Buoyancy +0.2 -0.2 N.D. +0.1 -0.1
auxotrophy YNB Glucose -0.2 +0.7 N.D. -0.3 -0.1
growth on ypd YPD +0.0 +0.3 N.D. -0.2 +0.0
buoyancy on lipid accumulation 40 hrs Low Buoyancy -0.4 +0.4 N.D. +0.1 +0.1
auxotrophy Dropout Complete -0.0 +0.6 N.D. -0.3 -0.1
auxotrophy YNB Glucose 75mM Arginine +0.1 +0.4 N.D. -0.2 -0.1
growth on oleic acid YNB Glucose +0.4 +0.5 N.D. -0.4 -0.1
buoyancy on lipid accumulation 40 hrs Median Buoyancy -0.3 +0.5 N.D. +0.2 -0.0
facs on lipid accumulation Sorted No BODIPY Gate +0.4 +0.2 N.D. -0.2 +0.1
growth on oleic acid YNB Oleic Acid +0.1 +0.4 N.D. -0.0 +0.1
ypd buoyancy 40 hrs No Buoyancy Separation +0.5 +0.2 N.D. +0.2 -0.3
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation +0.6 +0.5 N.D. -0.0 +0.0
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