Fitness for 5 genes in Rhodosporidium toruloides IFO0880

Add gene:

Number of genes on each side:  

Top 21 experiments (either direction), sorted by average fitness

Or view all 21 experiments or choose conditions or try the comparative fitness browser

500 nt 9604 and 9605 are separated by 271 nucleotides9605 and 9606 are separated by 624 nucleotides9606 and 9607 are separated by 452 nucleotides9607 and 9608 are separated by 376 nucleotides mRNA_1236: 9604 - K02377 TSTA3, fcl GDP-L-fucose synthase, at 722,261 to 724,161 9604 mRNA_1237: 9605 - SUPERFAMILY--SSF52047, at 724,433 to 725,551 9605 mRNA_1238: 9606 - SUPERFAMILY--SSF52047, at 726,176 to 728,961 9606 mRNA_1239: 9607 - KOG0032 Ca2+/calmodulin-dependent protein kinase, EF-Hand protein superfamily, at 729,414 to 732,263 9607 mRNA_1240: 9608 - Interpro Protein of unknown function (DUF1275) 0, at 732,640 to 733,855 9608
Group Condition mRNA_1236 mRNA_1237 mRNA_1238 mRNA_1239 mRNA_1240
9604 9605 9606 9607 9608
auxotrophy YNB Glucose 75mM Methionine N.D. -0.4 -0.1 -0.1 -0.3
ypd buoyancy 40 hrs No Buoyancy Separation N.D. +0.2 -0.3 -0.5 -0.2
buoyancy on lipid accumulation 40 hrs High Buoyancy N.D. +0.1 -0.0 -0.2 -0.6
auxotrophy Dropout Complete N.D. -0.3 -0.1 -0.1 -0.2
growth on oleic acid YNB Glucose N.D. -0.4 -0.1 -0.4 +0.3
ypd buoyancy 40 hrs High Buoyancy N.D. +0.1 -0.1 -0.1 -0.5
growth on ypd YPD N.D. -0.2 +0.0 -0.3 -0.0
auxotrophy YNB Glucose N.D. -0.3 -0.1 +0.1 -0.2
auxotrophy YNB Glucose 75mM Arginine N.D. -0.2 -0.1 +0.1 -0.3
ypd buoyancy 40 hrs Median Buoyancy N.D. +0.1 -0.0 -0.2 -0.2
growth on ricinoleic acid YNB Glucose N.D. -0.3 -0.1 +0.0 +0.1
ypd buoyancy 40 hrs Low Buoyancy N.D. +0.1 -0.1 -0.3 +0.1
growth on ricinoleic acid YNB Methylricinoleic Acid N.D. -0.2 -0.1 -0.2 +0.4
buoyancy on lipid accumulation 40 hrs Low Buoyancy N.D. +0.1 +0.1 -0.3 -0.1
facs on lipid accumulation Sorted Low BODIPY Gate N.D. -0.2 -0.1 -0.4 +0.5
growth on oleic acid YNB Oleic Acid N.D. -0.0 +0.1 -0.0 -0.1
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation N.D. -0.0 +0.0 -0.0 -0.1
facs on lipid accumulation Sorted No BODIPY Gate N.D. -0.2 +0.1 -0.1 +0.2
buoyancy on lipid accumulation 40 hrs Median Buoyancy N.D. +0.2 -0.0 +0.2 -0.4
facs on lipid accumulation Sorted High BODIPY Gate N.D. -0.1 -0.2 -0.2 +0.7
growth on ricinoleic acid YNB Ricinoleic Acid N.D. -0.2 -0.2 +0.3 +0.3
remove
mRNA_1236
plot
remove
mRNA_1237
plot
remove
mRNA_1238
remove
mRNA_1239
plot
remove
mRNA_1240
plot