Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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Top 21 experiments (either direction), sorted by average fitness

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500 nt 9607 and 9608 are separated by 376 nucleotides9608 and 9609 are separated by 516 nucleotides9609 and 9610 are separated by 229 nucleotides9610 and 9611 are separated by 106 nucleotides mRNA_1239: 9607 - KOG0032 Ca2+/calmodulin-dependent protein kinase, EF-Hand protein superfamily, at 729,414 to 732,263 9607 mRNA_1240: 9608 - Interpro Protein of unknown function (DUF1275) 0, at 732,640 to 733,855 9608 mRNA_1241: 9609 - K12893 SFRS4_5_6 splicing factor, arginine/serine-rich 4/5/6, at 734,372 to 735,961 9609 mRNA_1242: 9610 - K01110 PTEN phosphatidylinositol-3,4,5-trisphosphate 3-phosphatase and dual-specificity protein phosphatase PTEN, at 736,191 to 738,180 9610 mRNA_1243: 9611 - K02493 hemK, prmC, HEMK release factor glutamine methyltransferase, at 738,287 to 739,305 9611
Group Condition mRNA_1239 mRNA_1240 mRNA_1241 mRNA_1242 mRNA_1243
9607 9608 9609 9610 9611
ypd buoyancy 40 hrs No Buoyancy Separation -0.5 -0.2 -0.4 -0.2 -0.9
facs on lipid accumulation Sorted Low BODIPY Gate -0.4 +0.5 -1.2 -0.0 -0.2
auxotrophy Dropout Complete -0.1 -0.2 -1.0 -0.2 +0.5
buoyancy on lipid accumulation 40 hrs High Buoyancy -0.2 -0.6 -0.6 -0.2 +0.5
auxotrophy YNB Glucose 75mM Arginine +0.1 -0.3 -1.1 +0.1 +0.2
ypd buoyancy 40 hrs High Buoyancy -0.1 -0.5 +0.2 +0.2 -0.5
auxotrophy YNB Glucose +0.1 -0.2 -0.8 -0.0 +0.7
growth on ricinoleic acid YNB Glucose +0.0 +0.1 -1.1 +0.1 +0.7
buoyancy on lipid accumulation 40 hrs Low Buoyancy -0.3 -0.1 -0.3 -0.2 +0.6
ypd buoyancy 40 hrs Low Buoyancy -0.3 +0.1 +0.1 +0.2 -0.1
facs on lipid accumulation Sorted No BODIPY Gate -0.1 +0.2 -0.1 -0.4 +0.4
auxotrophy YNB Glucose 75mM Methionine -0.1 -0.3 -0.6 -0.1 +1.0
growth on oleic acid YNB Glucose -0.4 +0.3 -0.4 +0.2 +0.5
facs on lipid accumulation Sorted High BODIPY Gate -0.2 +0.7 -0.7 +0.1 +0.3
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation -0.0 -0.1 +0.3 -0.3 +0.4
growth on oleic acid YNB Oleic Acid -0.0 -0.1 -0.1 +0.2 +0.5
growth on ricinoleic acid YNB Ricinoleic Acid +0.3 +0.3 -0.5 +0.5 -0.1
growth on ricinoleic acid YNB Methylricinoleic Acid -0.2 +0.4 -0.3 +0.0 +0.8
ypd buoyancy 40 hrs Median Buoyancy -0.2 -0.2 +0.4 +0.4 +0.4
buoyancy on lipid accumulation 40 hrs Median Buoyancy +0.2 -0.4 +0.2 -0.1 +1.1
growth on ypd YPD -0.3 -0.0 +0.5 +0.6 +0.5
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