Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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Top 21 experiments (either direction), sorted by average fitness

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500 nt 9609 and 9610 are separated by 229 nucleotides9610 and 9611 are separated by 106 nucleotides9611 and 9612 are separated by 381 nucleotides9612 and 9613 are separated by 401 nucleotides mRNA_1241: 9609 - K12893 SFRS4_5_6 splicing factor, arginine/serine-rich 4/5/6, at 734,372 to 735,961 9609 mRNA_1242: 9610 - K01110 PTEN phosphatidylinositol-3,4,5-trisphosphate 3-phosphatase and dual-specificity protein phosphatase PTEN, at 736,191 to 738,180 9610 mRNA_1243: 9611 - K02493 hemK, prmC, HEMK release factor glutamine methyltransferase, at 738,287 to 739,305 9611 mRNA_1244: 9612 - SUPERFAMILY--SSF52047, at 739,687 to 741,319 9612 mRNA_1245: 9613 - HMMPfam-Magnesium transporter NIPA-PF05653,SUPERFAMILY--SSF103481, at 741,721 to 743,435 9613
Group Condition mRNA_1241 mRNA_1242 mRNA_1243 mRNA_1244 mRNA_1245
9609 9610 9611 9612 9613
facs on lipid accumulation Sorted Low BODIPY Gate -1.2 -0.0 -0.2 +0.1 -4.4
facs on lipid accumulation Sorted High BODIPY Gate -0.7 +0.1 +0.3 -0.0 -1.9
facs on lipid accumulation Sorted No BODIPY Gate -0.1 -0.4 +0.4 +0.1 -1.3
growth on ricinoleic acid YNB Glucose -1.1 +0.1 +0.7 +0.2 -0.9
auxotrophy Dropout Complete -1.0 -0.2 +0.5 +0.0 +0.1
growth on ricinoleic acid YNB Ricinoleic Acid -0.5 +0.5 -0.1 +0.3 -0.9
ypd buoyancy 40 hrs High Buoyancy +0.2 +0.2 -0.5 -0.1 -0.4
auxotrophy YNB Glucose -0.8 -0.0 +0.7 +0.2 -0.7
auxotrophy YNB Glucose 75mM Arginine -1.1 +0.1 +0.2 +0.1 +0.3
ypd buoyancy 40 hrs No Buoyancy Separation -0.4 -0.2 -0.9 +0.1 +0.9
auxotrophy YNB Glucose 75mM Methionine -0.6 -0.1 +1.0 +0.1 -0.5
ypd buoyancy 40 hrs Low Buoyancy +0.1 +0.2 -0.1 -0.1 -0.1
growth on oleic acid YNB Glucose -0.4 +0.2 +0.5 +0.2 -0.4
growth on ricinoleic acid YNB Methylricinoleic Acid -0.3 +0.0 +0.8 +0.3 -0.3
buoyancy on lipid accumulation 40 hrs Low Buoyancy -0.3 -0.2 +0.6 +0.3 -0.1
ypd buoyancy 40 hrs Median Buoyancy +0.4 +0.4 +0.4 -0.1 -0.5
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation +0.3 -0.3 +0.4 +0.1 +0.2
buoyancy on lipid accumulation 40 hrs High Buoyancy -0.6 -0.2 +0.5 +0.1 +1.1
growth on oleic acid YNB Oleic Acid -0.1 +0.2 +0.5 +0.1 +0.3
buoyancy on lipid accumulation 40 hrs Median Buoyancy +0.2 -0.1 +1.1 +0.1 +0.3
growth on ypd YPD +0.5 +0.6 +0.5 +0.2 -0.1
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