Fitness Browser
Home
Find Gene
BLAST
Experiments
Organisms
Help
Gene
Fitness
Nearby
Cofit
Protein
Homologs
Fitness for 5 genes in
Rhodosporidium toruloides IFO0880
Add gene:
Go
Number of genes on each side:
1
2
3
4
5
Go
Top 21 experiments (either direction), sorted by average fitness
Or view
all 21 experiments
or
choose conditions
or try the
comparative fitness browser
500 nt
9613 and 9614 are separated by 52 nucleotides
9614 and 9615 are separated by 451 nucleotides
9615 and 9616 are separated by 209 nucleotides
9616 and 9617 are separated by 526 nucleotides
mRNA_1245: 9613 - HMMPfam-Magnesium transporter NIPA-PF05653,SUPERFAMILY--SSF103481, at 741,721 to 743,435
9613
mRNA_1246: 9614 - SUPERFAMILY--SSF52047, at 743,488 to 744,876
9614
mRNA_1247: 9615 - Hypothetical Protein, at 745,328 to 746,839
9615
mRNA_1248: 9616 - KOG1289 Amino acid transporters, at 747,049 to 750,301
9616
mRNA_1249: 9617 - Hypothetical Protein, at 750,828 to 752,844
9617
Group
Condition
mRNA
_1245
mRNA
_1246
mRNA
_1247
mRNA
_1248
mRNA
_1249
9613
9614
9615
9616
9617
facs on lipid accumulation
Sorted Low BODIPY Gate
-4.4
-1.1
+0.2
+0.3
-0.2
facs on lipid accumulation
Sorted High BODIPY Gate
-1.9
+0.1
+0.0
-0.1
-0.2
facs on lipid accumulation
Sorted No BODIPY Gate
-1.3
-0.5
-0.1
+0.3
-0.2
growth on ypd
YPD
-0.1
-0.5
+0.1
-0.1
-0.1
buoyancy on lipid accumulation
40 hrs Low Buoyancy
-0.1
-0.4
-0.4
+0.1
+0.1
growth on ricinoleic acid
YNB Glucose
-0.9
+0.3
+0.2
+0.0
-0.3
ypd buoyancy
40 hrs Median Buoyancy
-0.5
+0.1
+0.0
+0.0
-0.1
growth on oleic acid
YNB Glucose
-0.4
+0.1
-0.0
+0.1
-0.3
ypd buoyancy
40 hrs High Buoyancy
-0.4
-0.0
-0.1
+0.3
-0.2
growth on ricinoleic acid
YNB Ricinoleic Acid
-0.9
+0.8
+0.3
-0.0
-0.2
buoyancy on lipid accumulation
40 hrs No Buoyancy Separation
+0.2
+0.2
-0.3
+0.1
-0.1
auxotrophy
YNB Glucose
-0.7
+0.4
+0.5
+0.0
-0.1
growth on oleic acid
YNB Oleic Acid
+0.3
+0.0
+0.2
-0.1
-0.1
auxotrophy
YNB Glucose 75mM Methionine
-0.5
+0.2
+0.4
+0.1
+0.1
buoyancy on lipid accumulation
40 hrs High Buoyancy
+1.1
-0.4
-0.3
+0.3
-0.2
ypd buoyancy
40 hrs Low Buoyancy
-0.1
+0.3
+0.0
+0.2
+0.0
ypd buoyancy
40 hrs No Buoyancy Separation
+0.9
-0.7
-0.0
+0.4
-0.0
growth on ricinoleic acid
YNB Methylricinoleic Acid
-0.3
+1.0
+0.1
+0.1
-0.2
buoyancy on lipid accumulation
40 hrs Median Buoyancy
+0.3
+0.4
-0.0
+0.3
+0.1
auxotrophy
Dropout Complete
+0.1
+0.7
+0.1
+0.1
+0.1
auxotrophy
YNB Glucose 75mM Arginine
+0.3
+0.5
+0.4
+0.2
+0.3
remove
mRNA_1245
plot
remove
mRNA_1246
plot
remove
mRNA_1247
remove
mRNA_1248
plot
remove
mRNA_1249
plot