Fitness Browser
Home
Find Gene
BLAST
Experiments
Organisms
Help
Gene
Fitness
Nearby
Cofit
Protein
Homologs
Fitness for 5 genes in
Rhodosporidium toruloides IFO0880
Add gene:
Go
Number of genes on each side:
1
2
3
4
5
Go
Top 21 experiments (either direction), sorted by average fitness
Or view
all 21 experiments
or
choose conditions
or try the
comparative fitness browser
500 nt
9619 and 9620 are separated by 239 nucleotides
9620 and 9621 are separated by 399 nucleotides
9621 and 9622 are separated by 715 nucleotides
9622 and 9623 are separated by 183 nucleotides
mRNA_1251: 9619 - HMMPfam-Protein of unknown function (DUF2611)-PF11022, at 756,531 to 757,355
9619
mRNA_1252: 9620 - BLAST glycosyltransferase family 22 protein [Mixia osmu..., at 757,595 to 759,040
9620
mRNA_1253: 9621 - K04554 UBE2J2, NCUBE2, UBC6 ubiquitin-conjugating enzyme E2 J2, at 759,440 to 760,414
9621
mRNA_1254: 9622 - K02150 ATPeV1E, ATP6E V-type H+-transporting ATPase subunit E, at 761,130 to 762,354
9622
mRNA_1255: 9623 - KOG1808 AAA ATPase containing von Willebrand factor type A (vWA) domain, at 762,538 to 767,686
9623
Group
Condition
mRNA
_1251
mRNA
_1252
mRNA
_1253
mRNA
_1254
mRNA
_1255
9619
9620
9621
9622
9623
ypd buoyancy
40 hrs No Buoyancy Separation
-0.1
-0.2
-1.5
N.D.
-0.1
ypd buoyancy
40 hrs High Buoyancy
-0.2
+0.2
-0.2
N.D.
-0.0
growth on ricinoleic acid
YNB Ricinoleic Acid
-0.4
+0.2
-0.1
N.D.
-0.0
growth on ricinoleic acid
YNB Methylricinoleic Acid
-0.7
+0.3
+0.3
N.D.
-0.1
growth on ricinoleic acid
YNB Glucose
-0.5
+0.2
+0.3
N.D.
-0.1
facs on lipid accumulation
Sorted High BODIPY Gate
+0.2
-0.1
-0.2
N.D.
-0.0
auxotrophy
YNB Glucose 75mM Arginine
-0.1
+0.2
-0.0
N.D.
-0.1
ypd buoyancy
40 hrs Low Buoyancy
-0.1
+0.3
-0.1
N.D.
-0.0
ypd buoyancy
40 hrs Median Buoyancy
+0.1
+0.2
-0.3
N.D.
+0.0
growth on ypd
YPD
+0.1
-0.3
+0.3
N.D.
-0.1
auxotrophy
YNB Glucose 75mM Methionine
+0.0
+0.0
+0.3
N.D.
-0.1
auxotrophy
YNB Glucose
-0.2
+0.2
+0.5
N.D.
-0.2
facs on lipid accumulation
Sorted No BODIPY Gate
+0.1
+0.3
+0.1
N.D.
+0.0
buoyancy on lipid accumulation
40 hrs No Buoyancy Separation
-0.3
+0.0
+0.7
N.D.
+0.0
auxotrophy
Dropout Complete
+0.4
+0.1
+0.2
N.D.
-0.1
growth on oleic acid
YNB Glucose
-0.0
+0.2
+0.4
N.D.
+0.0
growth on oleic acid
YNB Oleic Acid
+0.2
+0.2
+0.4
N.D.
+0.1
facs on lipid accumulation
Sorted Low BODIPY Gate
-0.1
+0.2
+0.8
N.D.
-0.0
buoyancy on lipid accumulation
40 hrs Median Buoyancy
-0.3
+0.3
+1.0
N.D.
+0.2
buoyancy on lipid accumulation
40 hrs High Buoyancy
+0.1
+0.1
+1.3
N.D.
+0.1
buoyancy on lipid accumulation
40 hrs Low Buoyancy
+0.5
+0.2
+1.5
N.D.
+0.1
remove
mRNA_1251
plot
remove
mRNA_1252
plot
remove
mRNA_1253
remove
mRNA_1254
plot
remove
mRNA_1255
plot